RNA–Protein interactions for RNA: ENST00000622132.4

ABCB1-211, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-211ENST00000622132 SMARCD1Q96GM5 515 aa9.02□□□□□ -0.97
ABCB1-211ENST00000622132 RNPC3Q96LT9 517 aaKnown RBP9.02□□□□□ -0.97
ABCB1-211ENST00000622132 ELOVL4Q9GZR5 314 aa9.02□□□□□ -0.97
ABCB1-211ENST00000622132 DMAP1Q9NPF5 467 aaPredicted RBP9.02□□□□□ -0.97
ABCB1-211ENST00000622132 TRPM5Q9NZQ8 1165 aa9.02□□□□□ -0.97
ABCB1-211ENST00000622132 MSRAQ9UJ68 235 aa9.02□□□□□ -0.97
ABCB1-211ENST00000622132 MICAL2O94851 1124 aa9.02□□□□□ -0.97
ABCB1-211ENST00000622132 ACRP10323 421 aa9.02□□□□□ -0.97
ABCB1-211ENST00000622132 NAIF1Q69YI7 327 aaPredicted RBP9.02□□□□□ -0.97
ABCB1-211ENST00000622132 C1orf127Q8N9H9 656 aa9.02□□□□□ -0.97
ABCB1-211ENST00000622132 EPS8L1Q8TE68 723 aa9.02□□□□□ -0.97
ABCB1-211ENST00000622132 DDX50Q9BQ39 737 aaKnown RBP9.02□□□□□ -0.97
ABCB1-211ENST00000622132 MRPL17Q9NRX2 175 aaKnown RBP9.02□□□□□ -0.97
ABCB1-211ENST00000622132 KLHL8Q9P2G9 620 aaPredicted RBP9.02□□□□□ -0.97
ABCB1-211ENST00000622132 DPP7Q9UHL4 492 aa9.02□□□□□ -0.97
ABCB1-211ENST00000622132 FBXO21O94952 628 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 IRF1P10914 325 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 CKBP12277 381 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 CCDC130P13994 396 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 PAX3P23760 479 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 PPM1AP35813 382 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 COG7P83436 770 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 ITIH3Q06033 890 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 TBX2Q13207 712 aaPredicted RBP9.01□□□□□ -0.97
ABCB1-211ENST00000622132 SMTNL2Q2TAL5 461 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 CCHCR1Q8TD31 782 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.01□□□□□ -0.97
ABCB1-211ENST00000622132 EMILIN2Q9BXX0 1053 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 LACRTQ9GZZ8 138 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 GANQ9H2C0 597 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 DUSP10Q9Y6W6 482 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 ARL5CA6NH57 179 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 PIGRP01833 764 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 CKMP06732 381 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 FGFR1P11362 822 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 MRPS25P82663 173 aaKnown RBP9.01□□□□□ -0.97
ABCB1-211ENST00000622132 MTMR3Q13615 1198 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 C1orf228Q6PIY5 440 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 YAF2Q8IY57 180 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 EMC1Q8N766 993 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 FAM107BQ9H098 131 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 FAM114A2Q9NRY5 505 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 DDX3XO00571 662 aaKnown RBP eCLIP9.01□□□□□ -0.972e-6■■■■■ 31.8
ABCB1-211ENST00000622132 EOMESO95936 686 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 CALCAP01258 141 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 C4BPAP04003 597 aaKnown RBP9.01□□□□□ -0.97
ABCB1-211ENST00000622132 CYBBP04839 570 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 ZFXP17010 805 aaPredicted RBP9.01□□□□□ -0.97
ABCB1-211ENST00000622132 SERPINB6P35237 376 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 TUFMP49411 452 aaKnown RBP9.01□□□□□ -0.97
ABCB1-211ENST00000622132 HARS2P49590 506 aaKnown RBP9.01□□□□□ -0.97
ABCB1-211ENST00000622132 C1QBPQ07021 282 aaKnown RBP9.01□□□□□ -0.97
ABCB1-211ENST00000622132 ADIGQ0VDE8 80 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 USP41Q3LFD5 358 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 ARHGAP15Q53QZ3 475 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 DENND2CQ68D51 928 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 B3GNT9Q6UX72 402 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 SERINC5Q86VE9 423 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 B3GALNT2Q8NCR0 500 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 SREK1Q8WXA9 508 aaKnown RBP9.01□□□□□ -0.97
ABCB1-211ENST00000622132 BTBD6Q96KE9 485 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 ANAPC5Q9UJX4 755 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 FBXL5Q9UKA1 691 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 SNX12Q9UMY4 172 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 DOCK2Q92608 1830 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 ARL1P40616 181 aaPredicted RBP9.01□□□□□ -0.97
ABCB1-211ENST00000622132 RECQLP46063 649 aaPredicted RBP9.01□□□□□ -0.97
ABCB1-211ENST00000622132 CNGA2Q16280 664 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 FAM187BQ17R55 369 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 BOLA3Q53S33 107 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 CDCA2Q69YH5 1023 aaPredicted RBP9.01□□□□□ -0.97
ABCB1-211ENST00000622132 ANKS3Q6ZW76 656 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 PALB2Q86YC2 1186 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 FAM71AQ8IYT1 594 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 RCOR2Q8IZ40 523 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 MCOLN2Q8IZK6 566 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 SNX27Q96L92 541 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 SELENOSQ9BQE4 189 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 NFKBIZQ9BYH8 718 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 DDX47Q9H0S4 455 aaKnown RBP9.01□□□□□ -0.97
ABCB1-211ENST00000622132 RMI1Q9H9A7 625 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 CDHR5Q9HBB8 845 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 KCNK9Q9NPC2 374 aa9.01□□□□□ -0.97
ABCB1-211ENST00000622132 DDX60LQ5H9U9 1706 aaKnown RBP9.01□□□□□ -0.97
ABCB1-211ENST00000622132 MOGSQ13724 837 aa9□□□□□ -0.97
ABCB1-211ENST00000622132 HEATR6Q6AI08 1181 aaKnown RBP9□□□□□ -0.97
ABCB1-211ENST00000622132 ZC3H18Q86VM9 953 aaKnown RBP9□□□□□ -0.97
ABCB1-211ENST00000622132 CHSY1Q86X52 802 aa9□□□□□ -0.97
ABCB1-211ENST00000622132 NPAS4Q8IUM7 802 aa9□□□□□ -0.97
ABCB1-211ENST00000622132 TMEM192Q8IY95 271 aa9□□□□□ -0.97
ABCB1-211ENST00000622132 TPCN2Q8NHX9 752 aa9□□□□□ -0.97
ABCB1-211ENST00000622132 TMEM161AQ9NX61 479 aa9□□□□□ -0.97
ABCB1-211ENST00000622132 CDH9Q9ULB4 789 aa9□□□□□ -0.97
ABCB1-211ENST00000622132 MYO9BQ13459 2157 aa9□□□□□ -0.97
ABCB1-211ENST00000622132 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9□□□□□ -0.97
ABCB1-211ENST00000622132 SYN1P17600 705 aa9□□□□□ -0.97
ABCB1-211ENST00000622132 EPHB1P54762 984 aa9□□□□□ -0.97
ABCB1-211ENST00000622132 SLC7A5Q01650 507 aa9□□□□□ -0.97
ABCB1-211ENST00000622132 BRD3Q15059 726 aa9□□□□□ -0.97
ABCB1-211ENST00000622132 LGSNQ5TDP6 509 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms