RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 RAP1GAPP47736 663 aa16.52■□□□□ 0.24
NPHP4-211ENST00000622020 KLC1Q07866 573 aa16.52■□□□□ 0.24
NPHP4-211ENST00000622020 MMRN1Q13201 1228 aa16.52■□□□□ 0.24
NPHP4-211ENST00000622020 WDTC1Q8N5D0 677 aa16.52■□□□□ 0.24
NPHP4-211ENST00000622020 SLC25A41Q8N5S1 370 aa16.52■□□□□ 0.24
NPHP4-211ENST00000622020 CYTH2Q99418 400 aa16.52■□□□□ 0.24
NPHP4-211ENST00000622020 TIPINQ9BVW5 301 aa16.52■□□□□ 0.24
NPHP4-211ENST00000622020 IMPG2Q9BZV3 1241 aa16.52■□□□□ 0.24
NPHP4-211ENST00000622020 PCDH9Q9HC56 1237 aa16.52■□□□□ 0.24
NPHP4-211ENST00000622020 ARHGAP28Q9P2N2 729 aa16.52■□□□□ 0.24
NPHP4-211ENST00000622020 SLC24A2Q9UI40 661 aa16.52■□□□□ 0.24
NPHP4-211ENST00000622020 LY75O60449 1722 aa16.52■□□□□ 0.24
NPHP4-211ENST00000622020 H3BRJ5 948 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 PEX10O60683 326 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 AMPD1P23109 780 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 TFAMQ00059 246 aaKnown RBP16.52■□□□□ 0.23
NPHP4-211ENST00000622020 EMC2Q15006 297 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 RAB6CQ53S08 254 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 CDHR3Q6ZTQ4 885 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 NIPA1Q7RTP0 329 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 PPIL6Q8IXY8 311 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 BANPQ8N9N5 519 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 PHC3Q8NDX5 983 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 NSL1Q96IY1 281 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 FAM161BQ96MY7 647 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 NMUR2Q9GZQ4 415 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 ZCWPW1Q9H0M4 648 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 RAB6CQ9H0N0 254 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 SLC38A10Q9HBR0 1119 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 RNF146Q9NTX7 359 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.52■□□□□ 0.23
NPHP4-211ENST00000622020 SHOC2Q9UQ13 582 aa16.52■□□□□ 0.23
NPHP4-211ENST00000622020 CYB561D2O14569 222 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 AP1G2O75843 785 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 RGS20O76081 388 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 ACTR2P61160 394 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 C11orf91Q3C1V1 193 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 WASHC2DQ5SRD0 308 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 RGS9BPQ6ZS82 235 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 PDIK1LQ8N165 341 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 DCAKDQ8WVC6 231 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 STMN2Q93045 179 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 SYNCQ9H7C4 482 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 KCNK13Q9HB14 408 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 CISHQ9NSE2 258 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 KBTBD13C9JR72 458 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 F5H423 210 aaPredicted RBP16.51■□□□□ 0.23
NPHP4-211ENST00000622020 STBD1O95210 358 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 UBTFL6P0CB48 400 aaPredicted RBP16.51■□□□□ 0.23
NPHP4-211ENST00000622020 GNAT1P11488 350 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 BMPR2Q13873 1038 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 ADGRD1Q6QNK2 874 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 TRIM72Q6ZMU5 477 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 PRPF39Q86UA1 669 aaKnown RBP16.51■□□□□ 0.23
NPHP4-211ENST00000622020 LARGE2Q8N3Y3 721 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 ARFGAP1Q8N6T3 406 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 PPM1NQ8N819 430 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 KCTD6Q8NC69 237 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 MCPH1Q8NEM0 835 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 TSC22D3Q99576 134 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 FOXP3Q9BZS1 431 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 RPAP3Q9H6T3 665 aaPredicted RBP16.51■□□□□ 0.23
NPHP4-211ENST00000622020 JPH1Q9HDC5 661 aaPredicted RBP16.51■□□□□ 0.23
NPHP4-211ENST00000622020 STOML1Q9UBI4 398 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 STAM2O75886 525 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 TOP3BO95985 862 aaKnown RBP16.51■□□□□ 0.23
NPHP4-211ENST00000622020 ITGAVP06756 1048 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 CEP128Q6ZU80 1094 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 TEKT4Q8WW24 435 aa16.51■□□□□ 0.23
NPHP4-211ENST00000622020 FARP1Q9Y4F1 1045 aaPredicted RBP16.51■□□□□ 0.23
NPHP4-211ENST00000622020 INHBAP08476 426 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 KRT19P08727 400 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 ZCCHC18P0CG32 403 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 KRT3P12035 628 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 CDH8P55286 799 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 POLE2P56282 527 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 SH3PXD2AQ5TCZ1 1133 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 DENND1BQ6P3S1 775 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 CCDC62Q6P9F0 684 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 RSBN1LQ6PCB5 846 aaPredicted RBP16.5■□□□□ 0.23
NPHP4-211ENST00000622020 ENDOVQ8N8Q3 282 aaKnown RBP16.5■□□□□ 0.23
NPHP4-211ENST00000622020 NAT8LQ8N9F0 302 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 SLC35B2Q8TB61 432 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 FBXO41Q8TF61 875 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 VCPIP1Q96JH7 1222 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 ZNF333Q96JL9 665 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 IQCGQ9H095 443 aaKnown RBP16.5■□□□□ 0.23
NPHP4-211ENST00000622020 ACSS3Q9H6R3 686 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 DRG1Q9Y295 367 aaKnown RBP16.5■□□□□ 0.23
NPHP4-211ENST00000622020 TCRBV9S1A1TA0A576 114 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 B2RBV5 119 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 FCHO1O14526 889 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 LRCH4O75427 683 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 BAG2O95816 211 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 PSAPP07602 524 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 RBP3P10745 1247 aa16.5■□□□□ 0.23
NPHP4-211ENST00000622020 CALRP27797 417 aaKnown RBP16.5■□□□□ 0.23
NPHP4-211ENST00000622020 EIF3EP60228 445 aaKnown RBP16.5■□□□□ 0.23
NPHP4-211ENST00000622020 FKBP1AP62942 108 aaKnown RBP16.5■□□□□ 0.23
NPHP4-211ENST00000622020 CDO1Q16878 200 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms