RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 PITPNM1O00562 1244 aa22.59■■□□□ 1.21
SPAST-204ENST00000621856 METTL23Q86XA0 190 aa22.59■■□□□ 1.21
SPAST-204ENST00000621856 IFT20Q8IY31 132 aa22.59■■□□□ 1.21
SPAST-204ENST00000621856 HNRNPABQ99729 332 aaKnown RBP22.59■■□□□ 1.21
SPAST-204ENST00000621856 SYT15Q9BQS2 421 aa22.59■■□□□ 1.21
SPAST-204ENST00000621856 MED10Q9BTT4 135 aa22.59■■□□□ 1.21
SPAST-204ENST00000621856 I3L4J1 428 aa22.58■■□□□ 1.21
SPAST-204ENST00000621856 PAX3P23760 479 aa22.58■■□□□ 1.21
SPAST-204ENST00000621856 TKTP29401 623 aaKnown RBP22.58■■□□□ 1.21
SPAST-204ENST00000621856 GUCY2DQ02846 1103 aa22.58■■□□□ 1.21
SPAST-204ENST00000621856 MDH1BQ5I0G3 518 aa22.58■■□□□ 1.21
SPAST-204ENST00000621856 NOMO2Q5JPE7 1267 aa22.58■■□□□ 1.21
SPAST-204ENST00000621856 CLLU1OSQ5K130 101 aa22.58■■□□□ 1.21
SPAST-204ENST00000621856 CCNI2Q6ZMN8 369 aaPredicted RBP22.58■■□□□ 1.21
SPAST-204ENST00000621856 MAATS1Q7Z4T9 603 aa22.58■■□□□ 1.21
SPAST-204ENST00000621856 TMEM110Q86TL2 294 aa22.58■■□□□ 1.21
SPAST-204ENST00000621856 DBF4BQ8NFT6 615 aa22.58■■□□□ 1.21
SPAST-204ENST00000621856 HASPINQ8TF76 798 aa22.58■■□□□ 1.21
SPAST-204ENST00000621856 SEPT8Q92599 483 aa22.58■■□□□ 1.21
SPAST-204ENST00000621856 PHF2O75151 1096 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 ZRANB2O95218 330 aaKnown RBP eCLIP22.57■■□□□ 1.2
SPAST-204ENST00000621856 KRT1P04264 644 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 GLI1P08151 1106 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 TCF4P15884 667 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 GPD1P21695 349 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 CETN2P41208 172 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 BRCC3P46736 316 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 SLC8A3P57103 927 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 SMC1AQ14683 1233 aaKnown RBP22.57■■□□□ 1.2
SPAST-204ENST00000621856 LLGL1Q15334 1064 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 PLEKHG4Q58EX7 1191 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 ODF2Q5BJF6 829 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 LRRC38Q5VT99 294 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 DCLRE1AQ6PJP8 1040 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 EXD1Q8NHP7 514 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 MAIP1Q8WWC4 291 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 EPB41L5Q9HCM4 733 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 AMACRQ9UHK6 382 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 TCRBV7S2A1N4TA0A589 114 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 CCDC142Q17RM4 750 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 BEND6Q5SZJ8 279 aaPredicted RBP22.57■■□□□ 1.2
SPAST-204ENST00000621856 GSPT2Q8IYD1 628 aaKnown RBP22.57■■□□□ 1.2
SPAST-204ENST00000621856 FUKQ8N0W3 1084 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 MAGOHBQ96A72 148 aaKnown RBP22.57■■□□□ 1.2
SPAST-204ENST00000621856 RBM41Q96IZ5 413 aaKnown RBP22.57■■□□□ 1.2
SPAST-204ENST00000621856 KLHL11Q9NVR0 708 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 TMEM161AQ9NX61 479 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 CDH9Q9ULB4 789 aa22.57■■□□□ 1.2
SPAST-204ENST00000621856 CLDN5O00501 218 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 FSCN2O14926 492 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 GRAP2O75791 330 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 RNF8O76064 485 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 LCP1P13796 627 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 ACADSBP45954 432 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 SLC6A3Q01959 620 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 GPNMBQ14956 572 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 HADHQ16836 314 aaKnown RBP22.56■■□□□ 1.2
SPAST-204ENST00000621856 KIAA0319Q5VV43 1072 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 OLFML1Q6UWY5 402 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 SLC39A5Q6ZMH5 540 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 ZDHHC17Q8IUH5 632 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 PRELID2Q8N945 189 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 RXFP2Q8WXD0 754 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 PIWIL1Q96J94 861 aaKnown RBP22.56■■□□□ 1.2
SPAST-204ENST00000621856 DUSP16Q9BY84 665 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 CYLDQ9NQC7 956 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 ASNSD1Q9NWL6 643 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 DDX56Q9NY93 547 aaKnown RBP22.56■■□□□ 1.2
SPAST-204ENST00000621856 KANSL3Q9P2N6 904 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 TSC2P49815 1807 aa22.56■■□□□ 1.2
SPAST-204ENST00000621856 ENPP3O14638 875 aa22.55■■□□□ 1.2
SPAST-204ENST00000621856 XPO1O14980 1071 aaKnown RBP22.55■■□□□ 1.2
SPAST-204ENST00000621856 PAPSS1O43252 624 aaPredicted RBP22.55■■□□□ 1.2
SPAST-204ENST00000621856 RARAP10276 462 aa22.55■■□□□ 1.2
SPAST-204ENST00000621856 PCSK1P29120 753 aa22.55■■□□□ 1.2
SPAST-204ENST00000621856 RNASELQ05823 741 aaKnown RBP22.55■■□□□ 1.2
SPAST-204ENST00000621856 ACAP1Q15027 740 aa22.55■■□□□ 1.2
SPAST-204ENST00000621856 ATP13A4Q4VNC1 1196 aa22.55■■□□□ 1.2
SPAST-204ENST00000621856 SCUBE3Q8IX30 993 aa22.55■■□□□ 1.2
SPAST-204ENST00000621856 RCOR2Q8IZ40 523 aa22.55■■□□□ 1.2
SPAST-204ENST00000621856 SPATA18Q8TC71 538 aa22.55■■□□□ 1.2
SPAST-204ENST00000621856 RSPH1Q8WYR4 309 aa22.55■■□□□ 1.2
SPAST-204ENST00000621856 RNF25Q96BH1 459 aaPredicted RBP22.55■■□□□ 1.2
SPAST-204ENST00000621856 HSFY1Q96LI6 401 aa22.55■■□□□ 1.2
SPAST-204ENST00000621856 CRTAC1Q9NQ79 661 aa22.55■■□□□ 1.2
SPAST-204ENST00000621856 GDF3Q9NR23 364 aa22.55■■□□□ 1.2
SPAST-204ENST00000621856 DSEQ9UL01 958 aa22.55■■□□□ 1.2
SPAST-204ENST00000621856 TANC1Q9C0D5 1861 aa22.55■■□□□ 1.2
SPAST-204ENST00000621856 ARHGEF37A1IGU5 675 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 ZSCAN5CA6NGD5 496 aaPredicted RBP22.54■■□□□ 1.2
SPAST-204ENST00000621856 DCDC2CA8MYV0 355 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 PI4K2BG5E9Z4 385 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 TTI1O43156 1089 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 LRCH4O75427 683 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 GABBR2O75899 941 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 MYBL2P10244 700 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 RALAP11233 206 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 COL6A1P12109 1028 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 PDGFRAP16234 1089 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 NPR3P17342 541 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms