RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 ANKMY2Q8IV38 441 aa13.71□□□□□ -0.21
SKP2-209ENST00000620197 FBXO36Q8NEA4 188 aa13.71□□□□□ -0.21
SKP2-209ENST00000620197 DNAJC9Q8WXX5 260 aa13.71□□□□□ -0.21
SKP2-209ENST00000620197 CYTH4Q9UIA0 394 aa13.71□□□□□ -0.21
SKP2-209ENST00000620197 MTO1Q9Y2Z2 717 aaKnown RBP13.71□□□□□ -0.21
SKP2-209ENST00000620197 SSTR3P32745 418 aaPredicted RBP13.71□□□□□ -0.22
SKP2-209ENST00000620197 PHBP35232 272 aa13.71□□□□□ -0.22
SKP2-209ENST00000620197 MAGEA6P43360 314 aa13.71□□□□□ -0.22
SKP2-209ENST00000620197 KAZNQ674X7 775 aa13.71□□□□□ -0.22
SKP2-209ENST00000620197 SLFN12LQ6IEE8 588 aa13.71□□□□□ -0.22
SKP2-209ENST00000620197 CEP120Q8N960 986 aa13.71□□□□□ -0.22
SKP2-209ENST00000620197 SPDYE1Q8NFV5 336 aaPredicted RBP13.71□□□□□ -0.22
SKP2-209ENST00000620197 CMASQ8NFW8 434 aaPredicted RBP13.71□□□□□ -0.22
SKP2-209ENST00000620197 TFAP2BQ92481 460 aa13.71□□□□□ -0.22
SKP2-209ENST00000620197 GATA6Q92908 595 aa13.71□□□□□ -0.22
SKP2-209ENST00000620197 RTP4Q96DX8 246 aa13.71□□□□□ -0.22
SKP2-209ENST00000620197 WNK4Q96J92 1243 aa13.71□□□□□ -0.22
SKP2-209ENST00000620197 ZBTB45Q96K62 511 aaPredicted RBP13.71□□□□□ -0.22
SKP2-209ENST00000620197 MAF1Q9H063 256 aa13.71□□□□□ -0.22
SKP2-209ENST00000620197 TAS2R1Q9NYW7 299 aa13.71□□□□□ -0.22
SKP2-209ENST00000620197 KCNG1Q9UIX4 513 aa13.71□□□□□ -0.22
SKP2-209ENST00000620197 TBC1D30Q9Y2I9 924 aa13.71□□□□□ -0.22
SKP2-209ENST00000620197 SPATA31C2B4DYI2 1134 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 DKC1O60832 514 aaKnown RBP eCLIP13.7□□□□□ -0.22
SKP2-209ENST00000620197 CST3P01034 146 aaPredicted RBP13.7□□□□□ -0.22
SKP2-209ENST00000620197 PSAPP07602 524 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 WEE2P0C1S8 567 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 VHLP40337 213 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 ASPAP45381 313 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 OTUD4Q01804 1114 aaKnown RBP13.7□□□□□ -0.22
SKP2-209ENST00000620197 DGKZQ13574 1117 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 EMC2Q15006 297 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 TEX44Q53QW1 395 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 FYB2Q5VWT5 728 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 FOXB2Q5VYV0 432 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 THNSL1Q8IYQ7 743 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 NSL1Q96IY1 281 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 NIFKQ9BYG3 293 aaKnown RBP13.7□□□□□ -0.22
SKP2-209ENST00000620197 LHX5Q9H2C1 402 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 C12orf65Q9H3J6 166 aaKnown RBP13.7□□□□□ -0.22
SKP2-209ENST00000620197 GINM1Q9NU53 330 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 TMOD2Q9NZR1 351 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 RIPK3Q9Y572 518 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 SPDYE5A6NIY4 337 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 VWA5AO00534 786 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 LDHAP00338 332 aaKnown RBP13.7□□□□□ -0.22
SKP2-209ENST00000620197 ATF7P17544 494 aaPredicted RBP13.7□□□□□ -0.22
SKP2-209ENST00000620197 TNNI1P19237 187 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 CCND2P30279 289 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 CETN2P41208 172 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 LIG4P49917 911 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 NCOA4Q13772 614 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 THEMIS2Q5TEJ8 643 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 C3orf62Q6ZUJ4 267 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 ACTL9Q8TC94 416 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 WDR60Q8WVS4 1066 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 YIPF3Q9GZM5 350 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 SPATS2LQ9NUQ6 558 aaKnown RBP13.7□□□□□ -0.22
SKP2-209ENST00000620197 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.7□□□□□ -0.22
SKP2-209ENST00000620197 MAGEC1O60732 1142 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 SP100P23497 879 aaPredicted RBP13.7□□□□□ -0.22
SKP2-209ENST00000620197 KDELR1P24390 212 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 AP3M2P53677 418 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 CNTN2Q02246 1040 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 AP1B1Q10567 949 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 TARBP2Q15633 366 aaKnown RBP13.7□□□□□ -0.22
SKP2-209ENST00000620197 LRRC6Q86X45 466 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 WDR49Q8IV35 697 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 BRSK2Q8IWQ3 736 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 FNBP1Q96RU3 617 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 XYLT2Q9H1B5 865 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 KRT82Q9NSB4 513 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 HEY2Q9UBP5 337 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 LRCH1Q9Y2L9 728 aa13.7□□□□□ -0.22
SKP2-209ENST00000620197 E5RJQ4 531 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 F8W8V4 182 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 ATP2A1O14983 1001 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 TBX10O75333 385 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 PSMG1O95456 288 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 TROVE2P10155 538 aaKnown RBP eCLIP13.69□□□□□ -0.22
SKP2-209ENST00000620197 PIM1P11309 404 aaPredicted RBP13.69□□□□□ -0.22
SKP2-209ENST00000620197 SWSAP1Q6NVH7 229 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 UNC45BQ8IWX7 931 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 TTC13Q8NBP0 860 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 PHC3Q8NDX5 983 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 ZNF526Q8TF50 670 aaPredicted RBP13.69□□□□□ -0.22
SKP2-209ENST00000620197 PYROXD1Q8WU10 500 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 C7orf26Q96N11 449 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 TMEM120AQ9BXJ8 343 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 JPH1Q9HDC5 661 aaPredicted RBP13.69□□□□□ -0.22
SKP2-209ENST00000620197 ZNF180Q9UJW8 692 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 TCRBV9S1A1TA0A576 114 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 A8MXQ7 604 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 H0YIN7 160 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 SGK1O00141 431 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 NVLO15381 856 aaKnown RBP13.69□□□□□ -0.22
SKP2-209ENST00000620197 NR3C2P08235 984 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 GABRB2P47870 512 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 ACTR2P61160 394 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 SLC34A1Q06495 639 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms