RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 TRAF7Q6Q0C0 670 aa13.39□□□□□ -0.27
TNFAIP3-209ENST00000619035 OSTM1Q86WC4 334 aa13.39□□□□□ -0.27
TNFAIP3-209ENST00000619035 RHOT1Q8IXI2 618 aa13.39□□□□□ -0.27
TNFAIP3-209ENST00000619035 TOP6BLQ8N6T0 577 aa13.39□□□□□ -0.27
TNFAIP3-209ENST00000619035 C3orf58Q8NDZ4 430 aa13.39□□□□□ -0.27
TNFAIP3-209ENST00000619035 PLVAPQ9BX97 442 aa13.39□□□□□ -0.27
TNFAIP3-209ENST00000619035 RNF208Q9H0X6 261 aa13.39□□□□□ -0.27
TNFAIP3-209ENST00000619035 KLHL11Q9NVR0 708 aa13.39□□□□□ -0.27
TNFAIP3-209ENST00000619035 WDR35Q9P2L0 1181 aa13.39□□□□□ -0.27
TNFAIP3-209ENST00000619035 ADAM21Q9UKJ8 722 aa13.39□□□□□ -0.27
TNFAIP3-209ENST00000619035 TIMM13Q9Y5L4 95 aaPredicted RBP13.39□□□□□ -0.27
TNFAIP3-209ENST00000619035 SIGLEC16A6NMB1 481 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 PSMA2P25787 234 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 AARSP49588 968 aaKnown RBP eCLIP13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 BFSP2Q13515 415 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 ZNF268Q14587 947 aaPredicted RBP13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 CLUL1Q15846 466 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 CCDC142Q17RM4 750 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 PMF1Q6P1K2 205 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 DSTYKQ6XUX3 929 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 ECHDC2Q86YB7 292 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 SLC2A14Q8TDB8 520 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 HASPINQ8TF76 798 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 DDX27Q96GQ7 796 aaKnown RBP13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 SENP8Q96LD8 212 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 ACBD3Q9H3P7 528 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 PSTPIP1O43586 416 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 ATP2C2O75185 946 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 RPL9P32969 192 aaKnown RBP13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 MAN1A1P33908 653 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 FLT3P36888 993 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 GABRB2P47870 512 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 PDE4CQ08493 712 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 FAM183BPQ6ZVS7 135 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 LRRC8DQ7L1W4 858 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 LIMS2Q7Z4I7 341 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 SLC13A5Q86YT5 568 aaPredicted RBP13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 B3GALNT2Q8NCR0 500 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 FAM71BQ8TC56 605 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 CAVIN3Q969G5 261 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 TNIP3Q96KP6 325 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 FTHL17Q9BXU8 183 aa13.38□□□□□ -0.27
TNFAIP3-209ENST00000619035 ERICH4A6NGS2 130 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 I3L4J1 428 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 INPPL1O15357 1258 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 PQBP1O60828 265 aaKnown RBP13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 GRAP2O75791 330 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 B3GAT3O94766 335 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 HSPA6P17066 643 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 WARSP23381 471 aaKnown RBP13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 ATN1P54259 1190 aaPredicted RBP13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 PIGHQ14442 188 aaPredicted RBP13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 ATP13A4Q4VNC1 1196 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 CRYBG2Q8N1P7 616 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 ACSF2Q96CM8 615 aaPredicted RBP13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 PIWIL1Q96J94 861 aaKnown RBP13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 PI4K2BG5E9Z4 385 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 EOMESO95936 686 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 CCL5P13501 91 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 SELPP16109 830 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 GSCP56915 257 aaPredicted RBP13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 GRIK3Q13003 919 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 UPP1Q16831 310 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 PKDCCQ504Y2 493 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 ODF2Q5BJF6 829 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 ARHGAP17Q68EM7 881 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 RTN4RL1Q86UN2 441 aaPredicted RBP13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 FAM126BQ8IXS8 530 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 PRELID2Q8N945 189 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 CCDC26Q8TAB7 109 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 RNF25Q96BH1 459 aaPredicted RBP13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 MCRS1Q96EZ8 462 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 ZIM3Q96PE6 472 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 HEMGNQ9BXL5 484 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 MIS12Q9H081 205 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 SLITRK6Q9H5Y7 841 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 FAM204AQ9H8W3 233 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 RGS18Q9NS28 235 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 DDX43Q9NXZ2 648 aaKnown RBP13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 MTUS1Q9ULD2 1270 aa13.37□□□□□ -0.27
TNFAIP3-209ENST00000619035 PITPNM1O00562 1244 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 KRT1P04264 644 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 COL6A1P12109 1028 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 TKTP29401 623 aaKnown RBP13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 BCAT1P54687 386 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 BST2Q10589 180 aaKnown RBP13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 TTC27Q6P3X3 843 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 SLC24A5Q71RS6 500 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 ZNF598Q86UK7 904 aaKnown RBP13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 SCUBE3Q8IX30 993 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 SLC35F5Q8WV83 523 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 LINC01599Q8WXQ3 324 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 MED4Q9NPJ6 270 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 CLDN5O00501 218 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 KRT14P02533 472 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 DR1Q01658 176 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 TIGD5Q53EQ6 642 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 MDH1BQ5I0G3 518 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 TXNRD3NBQ6F5E7 133 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 GLB1LQ6UWU2 654 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms