RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 TRIM56Q9BRZ2 755 aaKnown RBP14.49□□□□□ -0.09
CNOT3-210ENST00000618939 YIPF3Q9GZM5 350 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 SPATC1LQ9H0A9 340 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 CYP3A43Q9HB55 503 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 HEY2Q9UBP5 337 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 ZNF189O75820 626 aaPredicted RBP14.49□□□□□ -0.09
CNOT3-210ENST00000618939 PMLP29590 882 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 DEUP1Q05D60 604 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 POU5F1BQ06416 359 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 PDK1Q15118 436 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 PDK2Q15119 407 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 CHI3L2Q15782 390 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 ZACNQ401N2 412 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 DNAL1Q4LDG9 190 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 ZNF484Q5JVG2 852 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 SCG3Q8WXD2 468 aaKnown RBP14.49□□□□□ -0.09
CNOT3-210ENST00000618939 SPDL1Q96EA4 605 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 STAMBPL1Q96FJ0 436 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 GRID1Q9ULK0 1009 aa14.49□□□□□ -0.09
CNOT3-210ENST00000618939 FNDC3AQ9Y2H6 1198 aaKnown RBP14.49□□□□□ -0.09
CNOT3-210ENST00000618939 NUP188Q5SRE5 1749 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 BAZ2AQ9UIF9 1905 aaKnown RBP14.48□□□□□ -0.09
CNOT3-210ENST00000618939 FSCN2O14926 492 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 CSDE1O75534 798 aaKnown RBP14.48□□□□□ -0.09
CNOT3-210ENST00000618939 OCRLQ01968 901 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 MAMLD1Q13495 774 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 EFHC1Q5JVL4 640 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 MTHFD1LQ6UB35 978 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 ZNF572Q7Z3I7 529 aaPredicted RBP14.48□□□□□ -0.09
CNOT3-210ENST00000618939 ZCCHC9Q8N567 271 aaKnown RBP14.48□□□□□ -0.09
CNOT3-210ENST00000618939 ASAP3Q8TDY4 903 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 FAM172AQ8WUF8 416 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 SEMA4DQ92854 862 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 ART4Q93070 314 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 TSC22D3Q99576 134 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 VPS33BQ9H267 617 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 BATF3Q9NR55 127 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 GGA2Q9UJY4 613 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 PHRF1Q9P1Y6 1649 aaKnown RBP14.48□□□□□ -0.09
CNOT3-210ENST00000618939 CYP2C8P10632 490 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 PAPOLAP51003 745 aaKnown RBP14.48□□□□□ -0.09
CNOT3-210ENST00000618939 SNAPC2Q13487 334 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 LY6KQ17RY6 165 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 GLRA4Q5JXX5 417 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 SPOUT1Q5T280 376 aaKnown RBP14.48□□□□□ -0.09
CNOT3-210ENST00000618939 GSDMBQ8TAX9 411 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 CXorf56Q9H5V9 222 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 VCX3AQ9NNX9 186 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 SLIT2O94813 1529 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 EEF2KO00418 725 aaKnown RBP14.48□□□□□ -0.09
CNOT3-210ENST00000618939 TRPA1O75762 1119 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 MOCS2O96007 188 aaPredicted RBP14.48□□□□□ -0.09
CNOT3-210ENST00000618939 CYP2C9P11712 490 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 GLRA2P23416 452 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 SSTR1P30872 391 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 GNL1P36915 607 aaPredicted RBP14.48□□□□□ -0.09
CNOT3-210ENST00000618939 ALDH5A1P51649 535 aaPredicted RBP14.48□□□□□ -0.09
CNOT3-210ENST00000618939 CNGA2Q16280 664 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 DEFB132Q7Z7B7 95 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 CNPY4Q8N129 248 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 FAM84AQ96KN4 292 aa14.48□□□□□ -0.09
CNOT3-210ENST00000618939 SHOX2O60902 331 aaPredicted RBP14.47□□□□□ -0.09
CNOT3-210ENST00000618939 ZSCAN5DPP0CG00 497 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 EIF4BP23588 611 aaKnown RBP14.47□□□□□ -0.09
CNOT3-210ENST00000618939 CPA2P48052 419 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 CUL3Q13618 768 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 TDRD10Q5VZ19 366 aaKnown RBP14.47□□□□□ -0.09
CNOT3-210ENST00000618939 NEUROG2Q9H2A3 272 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 PCDHA2Q9Y5H9 948 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 A0A087WZ62 844 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 PKN2Q16513 984 aaKnown RBP14.47□□□□□ -0.09
CNOT3-210ENST00000618939 FDXACB1Q9BRP7 624 aaPredicted RBP14.47□□□□□ -0.09
CNOT3-210ENST00000618939 THTPAQ9BU02 230 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 SIX2Q9NPC8 291 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 LAMB4A4D0S4 1761 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 POLBP06746 335 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 PTPRAP18433 802 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 RABGAP1LQ5R372 815 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 NOTUMQ6P988 496 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 GPRC5AQ8NFJ5 357 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 TTC8Q8TAM2 541 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 FAM53CQ9NYF3 392 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 COG5Q9UP83 839 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.47□□□□□ -0.09
CNOT3-210ENST00000618939 GOLGA8CPA6NN73 597 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 ACKR2O00590 384 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 ATICP31939 592 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 CDH8P55286 799 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 ZNF268Q14587 947 aaPredicted RBP14.47□□□□□ -0.09
CNOT3-210ENST00000618939 RBBP5Q15291 538 aaKnown RBP14.47□□□□□ -0.09
CNOT3-210ENST00000618939 AMHR2Q16671 573 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 FASTKD1Q53R41 847 aaKnown RBP14.47□□□□□ -0.09
CNOT3-210ENST00000618939 SLC26A11Q86WA9 606 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 FUKQ8N0W3 1084 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 C2orf69Q8N8R5 385 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 ATP6V1E2Q96A05 226 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 MTBPQ96DY7 904 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 UPF3AQ9H1J1 476 aaKnown RBP14.47□□□□□ -0.09
CNOT3-210ENST00000618939 CYP39A1Q9NYL5 469 aa14.47□□□□□ -0.09
CNOT3-210ENST00000618939 POLIQ9UNA4 740 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms