RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 EFHBQ8N7U6 833 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 SPATA20Q8TB22 786 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 CLEC4CQ8WTT0 213 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 SAMD11Q96NU1 681 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 NT5C1AQ9BXI3 368 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 TSPY26PQ9H489 355 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 ZNF334Q9HCZ1 680 aaPredicted RBP4.9□□□□□ -1.63
SYCP1-210ENST00000618516 DMAC2Q9NW81 257 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 DNAJC12Q9UKB3 198 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 PCDHB8Q9UN66 801 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 PCDHB5Q9Y5E4 795 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 CABIN1Q9Y6J0 2220 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 H7C4K7 107 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 FOXN3O00409 490 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-210ENST00000618516 P4HA1P13674 534 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 FSHRP23945 695 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 GJC1P36383 396 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 ASPAP45381 313 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 PXNP49023 591 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-210ENST00000618516 UBASH3AP57075 661 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 GPC5P78333 572 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 GOLGA7BQ2TAP0 167 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 EDRF1Q3B7T1 1238 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 INTS6LQ5JSJ4 861 aaKnown RBP4.89□□□□□ -1.63
SYCP1-210ENST00000618516 ZFYVE27Q5T4F4 411 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 TRIM65Q6PJ69 517 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 GAS2L3Q86XJ1 694 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 ARID3BQ8IVW6 561 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-210ENST00000618516 KCTD17Q8N5Z5 321 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 RBBP8NLQ8NC74 664 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-210ENST00000618516 SMRP1Q8NCR6 262 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 ZSCAN18Q8TBC5 510 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-210ENST00000618516 CPA5Q8WXQ8 436 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 TFAP2BQ92481 460 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 CASP10Q92851 521 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 FBXO32Q969P5 355 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 BORCS6Q96GS4 357 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 EBF3Q9H4W6 596 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 EPHX3Q9H6B9 360 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 MTRRQ9UBK8 725 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 HESX1Q9UBX0 185 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 PLXNA4Q9HCM2 1894 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 ANK1P16157 1881 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 ANO9A1A5B4 782 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 ATMINO43313 823 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-210ENST00000618516 MSI1O43347 362 aaKnown RBP4.89□□□□□ -1.63
SYCP1-210ENST00000618516 XYLBO75191 536 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 ASS1P00966 412 aaKnown RBP4.89□□□□□ -1.63
SYCP1-210ENST00000618516 ABCB4P21439 1286 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 LRPAP1P30533 357 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 PNPLA4P41247 253 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 SSR1P43307 286 aaKnown RBP4.89□□□□□ -1.63
SYCP1-210ENST00000618516 ADIGQ0VDE8 80 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 EFEMP1Q12805 493 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 CUL2Q13617 745 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 DRAP1Q14919 205 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-210ENST00000618516 UBXN2BQ14CS0 331 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 TAF5Q15542 800 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 VWA3BQ502W6 1294 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 GBP6Q6ZN66 633 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 DENND5BQ6ZUT9 1274 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 CD302Q8IX05 232 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 DCP1BQ8IZD4 617 aaKnown RBP4.89□□□□□ -1.63
SYCP1-210ENST00000618516 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.89□□□□□ -1.63
SYCP1-210ENST00000618516 NETO2Q8NC67 525 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 UROC1Q96N76 676 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 CCSER2Q9H7U1 834 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 HEBP1Q9NRV9 189 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 TSPAN16Q9UKR8 245 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 WNT6Q9Y6F9 365 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 NUMBLQ9Y6R0 609 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 MYOFQ9NZM1 2061 aa4.89□□□□□ -1.63
SYCP1-210ENST00000618516 LAMA5O15230 3695 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 FRYQ5TBA9 3013 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 TRIM24O15164 1050 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 PRAMEF12O95522 483 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 FGFR1OPO95684 399 aaKnown RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 DCNP07585 359 aaKnown RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 FAM200BP0CF97 657 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 HDCP19113 662 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 GNA15P30679 374 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 GDI1P31150 447 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 WASP42768 502 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 COPB1P53618 953 aaKnown RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 SLC5A3P53794 718 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 ADKP55263 362 aaKnown RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 SURF1Q15526 300 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 LPAL2Q16609 132 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 KYAT1Q16773 422 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 KCTD19Q17RG1 926 aaPredicted RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 TJAP1Q5JTD0 557 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 C10orf120Q5SQS8 335 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 DAB2IPQ5VWQ8 1189 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 TANGO2Q6ICL3 276 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 GAREM2Q75VX8 874 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 FAM35AQ86V20 835 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 TRIM59Q8IWR1 403 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 FUKQ8N0W3 1084 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 TDRD5Q8NAT2 981 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms