RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 VNN1O95497 513 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 CCNE1P24864 410 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 DDX6P26196 483 aaKnown RBP eCLIP23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 WEE1P30291 646 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 AVPR1AP37288 418 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 ID4P47928 161 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 CDH8P55286 799 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 FZD5Q13467 585 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 PNOCQ13519 176 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 KCNB1Q14721 858 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 ARHGAP29Q52LW3 1261 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 ZNF667Q5HYK9 610 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 CELF5Q8N6W0 485 aaKnown RBP23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 TMEM174Q8WUU8 243 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 CLDN23Q96B33 292 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 TRMT2BQ96GJ1 504 aaKnown RBP23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 CCL26Q9Y258 94 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 OBSL1O75147 1896 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 DENND4CQ5VZ89 1909 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 A8MXQ7 604 aa23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 PTPN1P18031 435 aaKnown RBP23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 NR2F2P24468 414 aa23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 ANXA13P27216 316 aa23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 VSTM1Q6UX27 236 aa23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 SMYD4Q8IYR2 804 aaPredicted RBP23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 FMR1NBQ8N0W7 255 aaPredicted RBP23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 GUF1Q8N442 669 aaKnown RBP23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 TMC2Q8TDI7 906 aa23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 USP13Q92995 863 aaPredicted RBP23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 MYRFLQ96LU7 910 aa23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 GTSE1Q9NYZ3 720 aa23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 ZMYM5Q9UJ78 669 aa23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 FBXO4Q9UKT5 387 aa23.54■■□□□ 1.36
SYNGR3-206ENST00000618464 WDR87Q6ZQQ6 2873 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 CLDN5O00501 218 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 FAM163BP0C2L3 166 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 MAGEA9P43362 315 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 CSTF1Q05048 431 aaKnown RBP23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 TNK2Q07912 1038 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 ZNF528Q3MIS6 628 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 C1orf220Q5T0J3 134 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 MON1AQ86VX9 555 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 KIAA2013Q8IYS2 634 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 ZNF687Q8N1G0 1237 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 DCLK2Q8N568 766 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 SUMF1Q8NBK3 374 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 B3GALNT2Q8NCR0 500 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 TTC16Q8NEE8 873 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 CCDC34Q96HJ3 373 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 ZNF518BQ9C0D4 1074 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 SDCBP2Q9H190 292 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 VRTNQ9H8Y1 702 aa23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 THG1LQ9NWX6 298 aaKnown RBP23.53■■□□□ 1.36
SYNGR3-206ENST00000618464 AKAP3O75969 853 aa23.52■■□□□ 1.36
SYNGR3-206ENST00000618464 TRIM49P0CI25 452 aa23.52■■□□□ 1.36
SYNGR3-206ENST00000618464 TRIM49CP0CI26 452 aa23.52■■□□□ 1.36
SYNGR3-206ENST00000618464 PIK3CAP42336 1068 aa23.52■■□□□ 1.36
SYNGR3-206ENST00000618464 RPS9P46781 194 aaKnown RBP23.52■■□□□ 1.36
SYNGR3-206ENST00000618464 VAMP7P51809 220 aa23.52■■□□□ 1.36
SYNGR3-206ENST00000618464 ZACNQ401N2 412 aa23.52■■□□□ 1.36
SYNGR3-206ENST00000618464 SV2AQ7L0J3 742 aa23.52■■□□□ 1.36
SYNGR3-206ENST00000618464 SPATA17Q96L03 361 aa23.52■■□□□ 1.36
SYNGR3-206ENST00000618464 TDP1Q9NUW8 608 aa23.52■■□□□ 1.36
SYNGR3-206ENST00000618464 PTPRDP23468 1912 aa23.52■■□□□ 1.36
SYNGR3-206ENST00000618464 F5P12259 2224 aa23.52■■□□□ 1.36
SYNGR3-206ENST00000618464 ZNF638Q14966 1978 aaKnown RBP23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 ZNF292O60281 2723 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 F8VP50 259 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 TRIM66O15016 1216 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 CACNA2D1P54289 1103 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 USP46P62068 366 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 FOXK2Q01167 660 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 SPOPLQ6IQ16 392 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 TSSK4Q6SA08 328 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 FAM186BQ8IYM0 893 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 RIN3Q8TB24 985 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 SLC22A12Q96S37 553 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 CYP2S1Q96SQ9 504 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 B3GNT5Q9BYG0 378 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 C8orf33Q9H7E9 229 aaPredicted RBP23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 MMRN2Q9H8L6 949 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 LMAN1LQ9HAT1 526 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 GKN1Q9NS71 199 aa23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 EP300Q09472 2414 aaPredicted RBP23.51■■□□□ 1.35
SYNGR3-206ENST00000618464 TRAV19A0A0A6YYK7 116 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 SPECC1L-ADORA2AF8WAN1 911 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 KINO60870 393 aaKnown RBP23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 HLA-DRAP01903 254 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 CTHP32929 405 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 PLCB2Q00722 1185 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 MTAPQ13126 283 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 NFIL3Q16649 462 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 SGSM1Q2NKQ1 1148 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 TRIM68Q6AZZ1 485 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 TXNDC11Q6PKC3 985 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 DENND5BQ6ZUT9 1274 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 RUBCNQ92622 972 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 ERCC4Q92889 916 aaPredicted RBP23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 EEF2KMTQ96G04 330 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms