RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 SPATA31A1Q5TZJ5 1347 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 KANSL1LA0AUZ9 987 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 E9PMD0 336 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 TMX2-CTNND1H3BSU7 103 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 CCDC130P13994 396 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 IDO1P14902 403 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 PPARGP37231 505 aaPredicted RBP12.79□□□□□ -0.36
MATR3-227ENST00000618441 DRG2P55039 364 aaKnown RBP12.79□□□□□ -0.36
MATR3-227ENST00000618441 GNA12Q03113 381 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 NSUN2Q08J23 767 aaKnown RBP eCLIP12.79□□□□□ -0.36
MATR3-227ENST00000618441 PRR23BQ6ZRT6 265 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 SLC51AQ86UW1 340 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 STARD8Q92502 1023 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 PTCD3Q96EY7 689 aaKnown RBP12.79□□□□□ -0.36
MATR3-227ENST00000618441 WNK4Q96J92 1243 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 ZFRQ96KR1 1074 aaKnown RBP12.79□□□□□ -0.36
MATR3-227ENST00000618441 SNX25Q9H3E2 840 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 GINM1Q9NU53 330 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 KLHL11Q9NVR0 708 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 COMMD8Q9NX08 183 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 GIT1Q9Y2X7 761 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 MYPNQ86TC9 1320 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 USP17L12C9JPN9 530 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 USP17L21D6R901 530 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 AP3B1O00203 1094 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 TM7SF2O76062 418 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 MYCP01106 439 aaPredicted RBP12.79□□□□□ -0.36
MATR3-227ENST00000618441 ITIH2P19823 946 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 FGFR3P22607 806 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 TRPC1P48995 793 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 MRPS22P82650 360 aaKnown RBP12.79□□□□□ -0.36
MATR3-227ENST00000618441 EFTUD2Q15029 972 aaKnown RBP eCLIP12.79□□□□□ -0.365e-7■■■■□ 25.5
MATR3-227ENST00000618441 SF3B4Q15427 424 aaKnown RBP eCLIP12.79□□□□□ -0.361e-7■■■■□ 21.9
MATR3-227ENST00000618441 SMAD1Q15797 465 aaKnown RBP12.79□□□□□ -0.36
MATR3-227ENST00000618441 PTAR1Q7Z6K3 402 aaPredicted RBP12.79□□□□□ -0.36
MATR3-227ENST00000618441 TSPAN14Q8NG11 270 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 PLEKHO2Q8TD55 490 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 SPACA7Q96KW9 195 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 TTC25Q96NG3 672 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 GANQ9H2C0 597 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 GPRC5DQ9NZD1 345 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 COG5Q9UP83 839 aa12.79□□□□□ -0.36
MATR3-227ENST00000618441 PCP4L1A6NKN8 68 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 VDRP11473 427 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 HSPA6P17066 643 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 ENDOUP21128 410 aaKnown RBP12.78□□□□□ -0.36
MATR3-227ENST00000618441 STAT2P52630 851 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 NR1H2P55055 460 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 DNAL1Q4LDG9 190 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 CYFIP1Q7L576 1253 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 VASH1Q7L8A9 365 aaPredicted RBP12.78□□□□□ -0.36
MATR3-227ENST00000618441 KCNK18Q7Z418 384 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 DEFB107AQ8IZN7 70 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 TBCKQ8TEA7 893 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 ZSWIM1Q9BR11 485 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 GBA3Q9H227 469 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 NOL6Q9H6R4 1146 aaKnown RBP12.78□□□□□ -0.36
MATR3-227ENST00000618441 ZNF142P52746 1687 aaPredicted RBP12.78□□□□□ -0.36
MATR3-227ENST00000618441 ZMYM2Q9UBW7 1377 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 HMOX2P30519 316 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 ETFBP38117 255 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 NUP107P57740 925 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 RPS6P62753 249 aaKnown RBP12.78□□□□□ -0.36
MATR3-227ENST00000618441 C2CD6Q53TS8 623 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 CCDC89Q8N998 374 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 COQ7Q99807 217 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 IER2Q9BTL4 223 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 MECRQ9BV79 373 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 MRPS26Q9BYN8 205 aaKnown RBP12.78□□□□□ -0.36
MATR3-227ENST00000618441 SEMA6AQ9H2E6 1030 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 KMT5AQ9NQR1 393 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 UVRAGQ9P2Y5 699 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 EMSYQ7Z589 1322 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 ATP2A1O14983 1001 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 TOM1L1O75674 476 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 MSL3P1P0C860 447 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 ZSCAN5DPP0CG00 497 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 RPL10P27635 214 aaKnown RBP12.78□□□□□ -0.36
MATR3-227ENST00000618441 CASP4P49662 377 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 DYNLL1P63167 89 aaKnown RBP12.78□□□□□ -0.36
MATR3-227ENST00000618441 EVX2Q03828 476 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 BNIP3Q12983 259 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 UGT2A3Q6UWM9 527 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 LRP10Q7Z4F1 713 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 ZNF410Q86VK4 478 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 SPATA5Q8NB90 893 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 PYROXD1Q8WU10 500 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 TNFRSF25Q93038 417 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 PPP1R36Q96LQ0 422 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 RNF38Q9H0F5 515 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 TLE6Q9H808 572 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 QTRT2Q9H974 415 aaKnown RBP12.78□□□□□ -0.36
MATR3-227ENST00000618441 POU2F3Q9UKI9 436 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 SMIM18P0DKX4 95 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 CALM1P0DP23 149 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 CALM2P0DP24 149 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 CALM3P0DP25 149 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 CDH2P19022 906 aaPredicted RBP12.78□□□□□ -0.36
MATR3-227ENST00000618441 CYP2J2P51589 502 aa12.78□□□□□ -0.36
MATR3-227ENST00000618441 TPTEP56180 551 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms