RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 FAM124BQ9H5Z6 455 aaPredicted RBP8.4□□□□□ -1.06
CBWD1-227ENST00000618361 ABCB6Q9NP58 842 aa8.4□□□□□ -1.06
CBWD1-227ENST00000618361 ABI2Q9NYB9 513 aaPredicted RBP8.4□□□□□ -1.06
CBWD1-227ENST00000618361 GCNT4Q9P109 453 aa8.4□□□□□ -1.06
CBWD1-227ENST00000618361 BCCIPQ9P287 314 aaKnown RBP eCLIP8.4□□□□□ -1.06
CBWD1-227ENST00000618361 SUSD2Q9UGT4 822 aa8.4□□□□□ -1.06
CBWD1-227ENST00000618361 ARHGAP26Q9UNA1 814 aa8.4□□□□□ -1.06
CBWD1-227ENST00000618361 KIAA1024Q9UPX6 916 aa8.4□□□□□ -1.06
CBWD1-227ENST00000618361 PCDHB5Q9Y5E4 795 aa8.4□□□□□ -1.06
CBWD1-227ENST00000618361 NUP205Q92621 2012 aa8.4□□□□□ -1.06
CBWD1-227ENST00000618361 NAV2Q8IVL1 2488 aa8.4□□□□□ -1.07
CBWD1-227ENST00000618361 ASCC3Q8N3C0 2202 aaKnown RBP8.39□□□□□ -1.07
CBWD1-227ENST00000618361 ATXN2Q99700 1313 aaKnown RBP8.39□□□□□ -1.07
CBWD1-227ENST00000618361 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.39□□□□□ -1.07
CBWD1-227ENST00000618361 H0YCG3 227 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 SGK1O00141 431 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 PPEF2O14830 753 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 ATXN7O15265 892 aaPredicted RBP8.39□□□□□ -1.07
CBWD1-227ENST00000618361 SLC16A4O15374 487 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 CBFA2T3O75081 653 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 DKK1O94907 266 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 CTDNEP1O95476 244 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 CKMP06732 381 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 MAPTP10636 758 aaKnown RBP8.39□□□□□ -1.07
CBWD1-227ENST00000618361 PLS3P13797 630 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 FDPSP14324 419 aaKnown RBP8.39□□□□□ -1.07
CBWD1-227ENST00000618361 SCP2P22307 547 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 GUCY2CP25092 1073 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 CDC25AP30304 524 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 RPL6Q02878 288 aaKnown RBP8.39□□□□□ -1.07
CBWD1-227ENST00000618361 PDIA5Q14554 519 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 PREPLQ4J6C6 727 aaPredicted RBP8.39□□□□□ -1.07
CBWD1-227ENST00000618361 RINT1Q6NUQ1 792 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 C1orf186Q6ZWK4 172 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 TRMT11Q7Z4G4 463 aaKnown RBP8.39□□□□□ -1.07
CBWD1-227ENST00000618361 PGBD3Q8N328 593 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 GALNT15Q8N3T1 639 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 KCTD17Q8N5Z5 321 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 ALLCQ8N6M5 410 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 PNPLA1Q8N8W4 532 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 TMEM161BQ8NDZ6 487 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 SPATA18Q8TC71 538 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 SH3RF2Q8TEC5 729 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 CEP295NLQ96MC4 621 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 CAMK1GQ96NX5 476 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 PNKPQ96T60 521 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 LARP6Q9BRS8 491 aaKnown RBP8.39□□□□□ -1.07
CBWD1-227ENST00000618361 LINC00597Q9H2U6 94 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 RPF1Q9H9Y2 349 aaKnown RBP8.39□□□□□ -1.07
CBWD1-227ENST00000618361 FSCN3Q9NQT6 498 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 PDRG1Q9NUG6 133 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 DDX19AQ9NUU7 478 aaKnown RBP8.39□□□□□ -1.07
CBWD1-227ENST00000618361 PCOLCE2Q9UKZ9 415 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 MAGED2Q9UNF1 606 aaPredicted RBP8.39□□□□□ -1.07
CBWD1-227ENST00000618361 DNM3Q9UQ16 869 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 URB1O60287 2271 aaKnown RBP8.39□□□□□ -1.07
CBWD1-227ENST00000618361 ABCA7Q8IZY2 2146 aa8.39□□□□□ -1.07
CBWD1-227ENST00000618361 TCRBV21S2A2A0A5A6 115 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 CYB561D2O14569 222 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 SLC9A3R1O14745 358 aaPredicted RBP8.38□□□□□ -1.07
CBWD1-227ENST00000618361 OGTO15294 1046 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 FAM189A1O60320 539 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 ADAM23O75077 832 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 PRPF40AO75400 957 aaKnown RBP8.38□□□□□ -1.07
CBWD1-227ENST00000618361 C1QL1O75973 258 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 KAT7O95251 611 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 KLF8O95600 359 aaPredicted RBP8.38□□□□□ -1.07
CBWD1-227ENST00000618361 PRB1P04280 392 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 APODP05090 189 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 NFICP08651 508 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 ZNF883P0CG24 379 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 GNSP15586 552 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 HDCP19113 662 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 TIE1P35590 1138 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 TNFSF9P41273 254 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 GRIA2P42262 883 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 MATR3P43243 847 aaKnown RBP eCLIP8.38□□□□□ -1.07
CBWD1-227ENST00000618361 ABCG1P45844 678 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 TAF6P49848 677 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 GUCY2FP51841 1108 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 TSPY1Q01534 308 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 POU5F1Q01860 360 aaKnown RBP8.38□□□□□ -1.07
CBWD1-227ENST00000618361 CYP4F3Q08477 520 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 TRIM29Q14134 588 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 KCNB1Q14721 858 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 ENOX2Q16206 610 aaKnown RBP8.38□□□□□ -1.07
CBWD1-227ENST00000618361 LARP1BQ659C4 914 aaKnown RBP8.38□□□□□ -1.07
CBWD1-227ENST00000618361 LRRC69Q6ZNQ3 347 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 SLCO6A1Q86UG4 719 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 ADGRG2Q8IZP9 1017 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 TMEM130Q8N3G9 435 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 HMGB4Q8WW32 186 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 ZNF419Q96HQ0 510 aaPredicted RBP8.38□□□□□ -1.07
CBWD1-227ENST00000618361 YTHDC1Q96MU7 727 aaKnown RBP8.38□□□□□ -1.07
CBWD1-227ENST00000618361 PNMA5Q96PV4 448 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 SLC22A12Q96S37 553 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 CYP2S1Q96SQ9 504 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 CDC6Q99741 560 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 RAB34Q9BZG1 259 aa8.38□□□□□ -1.07
CBWD1-227ENST00000618361 HAPLN2Q9GZV7 340 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms