RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 NDUFB10O96000 172 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 CYP11B1P15538 503 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 MEA1Q16626 185 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 GDPD5Q8WTR4 605 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 GLMNQ92990 594 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 CCDC126Q96EE4 140 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 TMEM79Q9BSE2 394 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 NT5C1AQ9BXI3 368 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 CYP39A1Q9NYL5 469 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 CDC42BPGQ6DT37 1551 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 SYNDIG1LA6NDD5 238 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 SUPT3HB4E1H0 165 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 HIST1H2AGP0C0S8 130 aaPredicted RBP11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 HIST1H2ADP20671 130 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 RAB14P61106 215 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 CEP78Q5JTW2 689 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 DPY19L2Q6NUT2 758 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 KYQ8NBH2 561 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 ZNF483Q8TF39 744 aaPredicted RBP11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 ACSF2Q96CM8 615 aaPredicted RBP11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 MASTLQ96GX5 879 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 HIST1H2AHQ96KK5 128 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 HIST1H2AJQ99878 128 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 H2AFJQ9BTM1 129 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 MYLK2Q9H1R3 596 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 SHOC2Q9UQ13 582 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 SALL3Q9BXA9 1300 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 IGSF9BQ9UPX0 1349 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 C5orf58C9J3I9 102 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 POLRMTO00411 1230 aaKnown RBP11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 PROSCO94903 275 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 TGM2P21980 687 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 ADARP55265 1226 aaKnown RBP11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 TTLL4Q14679 1199 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 PCNX4Q63HM2 1172 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 PDPK2PQ6A1A2 396 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 CIAPIN1Q6FI81 312 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 LUZP2Q86TE4 346 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 RMND5BQ96G75 393 aaPredicted RBP11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 CNGB3Q9NQW8 809 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 C2CD2Q9Y426 696 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 IQSEC2Q5JU85 1478 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 SDR42E2A6NKP2 422 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 RGS5O15539 181 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 SLC37A4O43826 429 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 AHCYL1O43865 530 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 SNX3O60493 162 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 CBX6O95503 412 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 BCL10O95999 233 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 FCGR1AP12314 374 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 ATP4AP20648 1035 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 RPL21P46778 160 aaKnown RBP11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 CASP4P49662 377 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 SLC25A41Q8N5S1 370 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 PRCCQ92733 491 aaPredicted RBP11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 OTULINQ96BN8 352 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 GLI2P10070 1586 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 E9PBE3 544 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 KLHL41O60662 606 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 RGS2P41220 211 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 ACADSBP45954 432 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 SPP2Q13103 211 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 DCTN2Q13561 401 aaKnown RBP11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 CUL2Q13617 745 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 AGAP9Q5VTM2 703 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 TFB1MQ8WVM0 346 aaKnown RBP11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 OXNAD1Q96HP4 312 aaPredicted RBP11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 AGBL1Q96MI9 1066 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 IMPAD1Q9NX62 359 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 CD274Q9NZQ7 290 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 MROH7Q68CQ1 1323 aa11.05□□□□□ -0.64
CLTCL1-209ENST00000617103 KPNA4O00629 521 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 CPA3P15088 417 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 TNFRSF8P28908 595 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 BLVRAP53004 296 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 GTF2H3Q13889 308 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 TMEM132DQ14C87 1099 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 NTRK3Q16288 839 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 CYP4A22Q5TCH4 519 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 RNF219Q5W0B1 726 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 TMC5Q6UXY8 1006 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 LINC00523Q86TU6 105 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 AFG1LQ8WV93 481 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 THUMPD3Q9BV44 507 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 COPG2Q9UBF2 871 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 SFMBT1Q9UHJ3 866 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 LRRC10BA6NIK2 292 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 TNPO2O14787 897 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 SUPT7LO94864 414 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 RRM1P23921 792 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 PTPN7P35236 360 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 ROR2Q01974 943 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 LRRC74AQ0VAA2 488 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 LAMC2Q13753 1193 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 MTFR1Q15390 333 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 CCDC142Q17RM4 750 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 TAF2Q6P1X5 1199 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 IPMKQ8NFU5 416 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 TCP10LQ8TDR4 215 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 PHF21AQ96BD5 680 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms