RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 HEPHQ9BQS7 1158 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 CHD2O14647 1828 aaKnown RBP14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 SAC3D1A6NKF1 404 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 DCXO43602 365 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 GAS7O60861 476 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 CDK4P11802 303 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 RXRGP48443 463 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 SF3B3Q15393 1217 aaKnown RBP14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 PPP6R3Q5H9R7 873 aaPredicted RBP14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 AAGABQ6PD74 315 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 FRA10AC1Q70Z53 315 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 MARCH7Q9H992 704 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 MRPL47Q9HD33 250 aaKnown RBP14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 EMSYQ7Z589 1322 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 A0A087WXM4 84 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 GOLGA8QA0A0J9YX86 632 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 GOLGA8OA6NCC3 632 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 GOLGA8NF8WBI6 632 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 ATP2B4P23634 1241 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 RELAQ04206 551 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 OGFOD2Q6N063 350 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 C16orf89Q6UX73 402 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 PRR23CQ6ZRP0 262 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 LRRC55Q6ZSA7 311 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 FBXO36Q8NEA4 188 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 ZFP28Q8NHY6 868 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 CDRT15Q96T59 188 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 CENPOQ9BU64 300 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 GCOM2Q9BZD3 368 aaPredicted RBP14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 TBCCD1Q9NVR7 557 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 PSMD11O00231 422 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 ETFBP38117 255 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 SERPINB10P48595 397 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 TTLL12Q14166 644 aaPredicted RBP14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 SCYL2Q6P3W7 929 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 USP17L6PQ6QN14 398 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 ATG14Q6ZNE5 492 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 PQLC1Q8N2U9 271 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 ZBTB38Q8NAP3 1195 aaPredicted RBP14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 ATXN7L3BQ96GX2 97 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 NSMCE3Q96MG7 304 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 OXCT2Q9BYC2 517 aaPredicted RBP14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 POLR1BQ9H9Y6 1135 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 FAIMQ9NVQ4 179 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 LINC00854A0A1B0GVQ3 168 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 PIK3CDO00329 1044 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 SERPINI2O75830 405 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 ZSCAN5DPP0CG00 497 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 ACTR3P61158 418 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 HADHQ16836 314 aaKnown RBP14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 SLC2A7Q6PXP3 512 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 BNC2Q6ZN30 1099 aaPredicted RBP14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 IRF2BP2Q7Z5L9 587 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 FOXP3Q9BZS1 431 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 FAM96AQ9H5X1 160 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 PTPRMP28827 1452 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 LMTK2Q8IWU2 1503 aa14.1□□□□□ -0.15
PPP4R3B-205ENST00000616288 BIRC5O15392 142 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 MAGEC1O60732 1142 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 SIN3BO75182 1162 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 CYP1A1P04798 512 aaPredicted RBP14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 NR4A1P22736 598 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 NMT1P30419 496 aaKnown RBP14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 ECE1P42892 770 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 WASHC5Q12768 1159 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 EDRF1Q3B7T1 1238 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 TBC1D9BQ66K14 1250 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 MCF2L2Q86YR7 1114 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 MTG1Q9BT17 334 aaPredicted RBP14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 RPAP3Q9H6T3 665 aaPredicted RBP14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 SLC24A2Q9UI40 661 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 PNPLA7Q6ZV29 1317 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 F5H423 210 aaPredicted RBP14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 GNGT2O14610 69 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 PFDN6O15212 129 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 BCAP31P51572 246 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 BMPR2Q13873 1038 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 ASTE1Q2TB18 679 aaPredicted RBP14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 CMPK2Q5EBM0 449 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 RTKN2Q8IZC4 609 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 AFAP1L2Q8N4X5 818 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 CPA5Q8WXQ8 436 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 ACSF2Q96CM8 615 aaPredicted RBP14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 CEP19Q96LK0 163 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 VPS51Q9UID3 782 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 PSMD12O00232 456 aaPredicted RBP14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 TLR3O15455 904 aaKnown RBP14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 IDH3BO43837 385 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 ZC3H11AO75152 810 aaKnown RBP eCLIP14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 BANF1O75531 89 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 AKAP3O75969 853 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 ZNF12P17014 697 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 MAGP20916 626 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 RPA1P27694 616 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 TEDDM1Q5T9Z0 273 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 POTEHQ6S545 545 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 FAM172AQ8WUF8 416 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 CEP295NLQ96MC4 621 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 DEPDC7Q96QD5 511 aa14.09□□□□□ -0.15
PPP4R3B-205ENST00000616288 XPO7Q9UIA9 1087 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms