RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ATP2B4P23634 1241 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 MMEL1Q495T6 779 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 SCARA3Q6AZY7 606 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 CDHR3Q6ZTQ4 885 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 ACTL9Q8TC94 416 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 DDX1Q92499 740 aaKnown RBP13.77□□□□□ -0.21
MSH6-214ENST00000616033 SPATA16Q9BXB7 569 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 EURLQ9NYK6 297 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 ARFGEF1Q9Y6D6 1849 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 GRIN3BO60391 1043 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 CST8O60676 142 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 TCEA3O75764 348 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 EIF2AK2P19525 551 aaKnown RBP13.77□□□□□ -0.21
MSH6-214ENST00000616033 ELK3P41970 407 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 SLC1A1P43005 524 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 OTUD4Q01804 1114 aaKnown RBP13.77□□□□□ -0.21
MSH6-214ENST00000616033 MTA1Q13330 715 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 DYNC1I2Q13409 638 aaKnown RBP13.77□□□□□ -0.21
MSH6-214ENST00000616033 ORC1Q13415 861 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 MAMLD1Q13495 774 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 MED21Q13503 144 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 PAOXQ6QHF9 649 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 POLNQ7Z5Q5 900 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 OGFOD1Q8N543 542 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 ATP11CQ8NB49 1132 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 HSPH1Q92598 858 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 MBOAT7Q96N66 472 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 SCN7AQ01118 1682 aa13.77□□□□□ -0.21
MSH6-214ENST00000616033 MMP10P09238 476 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 C6orf222P0C671 652 aaPredicted RBP13.76□□□□□ -0.21
MSH6-214ENST00000616033 NCF2P19878 526 aaPredicted RBP13.76□□□□□ -0.21
MSH6-214ENST00000616033 KLF1Q13351 362 aaPredicted RBP13.76□□□□□ -0.21
MSH6-214ENST00000616033 ACAP1Q15027 740 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 KCTD21Q4G0X4 260 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 IYDQ6PHW0 289 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 DENND5BQ6ZUT9 1274 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 SIAH1Q8IUQ4 282 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 ARHGAP18Q8N392 663 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 TRAPPC9Q96Q05 1148 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 SENP7Q9BQF6 1050 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 KCNK13Q9HB14 408 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 KMT5AQ9NQR1 393 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 ACSS2Q9NR19 701 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 APPL1Q9UKG1 709 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 MTO1Q9Y2Z2 717 aaKnown RBP13.76□□□□□ -0.21
MSH6-214ENST00000616033 MAD1L1Q9Y6D9 718 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 AQP4P55087 323 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 COG7P83436 770 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 BST1Q10588 318 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 DLG1Q12959 904 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 UGCGQ16739 394 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 EML3Q32P44 896 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 MROH9Q5TGP6 573 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 IGDCC3Q8IVU1 814 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 RNF168Q8IYW5 571 aaPredicted RBP13.76□□□□□ -0.21
MSH6-214ENST00000616033 PDIK1LQ8N165 341 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 IL31RAQ8NI17 732 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 TDRD3Q9H7E2 651 aaKnown RBP13.76□□□□□ -0.21
MSH6-214ENST00000616033 PIH1D1Q9NWS0 290 aaKnown RBP13.76□□□□□ -0.21
MSH6-214ENST00000616033 SENP1Q9P0U3 644 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 ZNF212Q9UDV6 495 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 UMODL1Q5DID0 1318 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 IRS2Q9Y4H2 1338 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 TESPA1A2RU30 521 aaPredicted RBP13.76□□□□□ -0.21
MSH6-214ENST00000616033 UGT1A9O60656 530 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 LYPLA1O75608 230 aaPredicted RBP13.76□□□□□ -0.21
MSH6-214ENST00000616033 MTA2O94776 668 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 PEX2P28328 305 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 STAT2P52630 851 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 SFT2D3Q587I9 215 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 BSPRYQ5W0U4 402 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 EMC1Q8N766 993 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 RNF148Q8N7C7 305 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 CRYGNQ8WXF5 182 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 UGT1A7Q9HAW7 530 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 UGT1A10Q9HAW8 530 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 UGT1A8Q9HAW9 530 aa13.76□□□□□ -0.21
MSH6-214ENST00000616033 DMAP1Q9NPF5 467 aaPredicted RBP13.76□□□□□ -0.21
MSH6-214ENST00000616033 KBTBD13C9JR72 458 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 RAD17O75943 681 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 RARBP10826 455 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 YWHABP31946 246 aaKnown RBP13.75□□□□□ -0.21
MSH6-214ENST00000616033 RARRES1P49788 294 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 PDE1CQ14123 709 aaPredicted RBP13.75□□□□□ -0.21
MSH6-214ENST00000616033 C16orf46Q6P387 395 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 NUDCD3Q8IVD9 361 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 DCAF4Q8WV16 495 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 SLCO2A1Q92959 643 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 KCNH7Q9NS40 1196 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 ECE2O60344 883 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 DLDP09622 509 aaKnown RBP13.75□□□□□ -0.21
MSH6-214ENST00000616033 NELFEP18615 380 aaKnown RBP13.75□□□□□ -0.21
MSH6-214ENST00000616033 INHBCP55103 352 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 MOXD1Q6UVY6 613 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 C14orf80Q86SX3 495 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 RFX6Q8HWS3 928 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 PRPF31Q8WWY3 499 aaKnown RBP13.75□□□□□ -0.21
MSH6-214ENST00000616033 TIPINQ9BVW5 301 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 TMEM8AQ9HCN3 771 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 195.9 ms