RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 PARP9Q8IXQ6 854 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 EME1Q96AY2 570 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 UBP1Q9NZI7 540 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 CNTNAP2Q9UHC6 1331 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 EPHB3P54753 998 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 OXCT1P55809 520 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 LY6KQ17RY6 165 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 CCDC3Q9BQI4 270 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 PTPRHQ9HD43 1115 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 UVRAGQ9P2Y5 699 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 RPS6KB2Q9UBS0 482 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 CAB39Q9Y376 341 aaPredicted RBP19.41■□□□□ 0.7
GABPB1-212ENST00000615671 SLC37A4O43826 429 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 SGPL1O95470 568 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 TRIM65Q6PJ69 517 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 NDOR1Q9UHB4 597 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 MTFR1Q15390 333 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 THUMPD3Q9BV44 507 aaKnown RBP19.41■□□□□ 0.7
GABPB1-212ENST00000615671 GYS1P13807 737 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 OSMRQ99650 979 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 TNNI3P19429 210 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 DOK6Q6PKX4 331 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 ARMC2Q8NEN0 867 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 CYFIP2Q96F07 1278 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 IARS2Q9NSE4 1012 aaKnown RBP19.4■□□□□ 0.7
GABPB1-212ENST00000615671 TMEM39AQ9NV64 488 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 FBXO10Q9UK96 956 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 TGM2P21980 687 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 ZNF512BQ96KM6 892 aaPredicted RBP19.4■□□□□ 0.7
GABPB1-212ENST00000615671 SNX8Q9Y5X2 465 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 STAU1O95793 577 aaKnown RBP19.4■□□□□ 0.7
GABPB1-212ENST00000615671 SLC15A2Q16348 729 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 DDX42Q86XP3 938 aaKnown RBP eCLIP19.4■□□□□ 0.7
GABPB1-212ENST00000615671 KRT35Q92764 455 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 RSAD1Q9HA92 442 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 UBQLN1Q9UMX0 589 aaKnown RBP19.4■□□□□ 0.7
GABPB1-212ENST00000615671 PRDM15P57071 1507 aaPredicted RBP19.4■□□□□ 0.7
GABPB1-212ENST00000615671 MAGEA4P43358 317 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 TRIM69Q86WT6 500 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 GEMIN8Q9NWZ8 242 aaKnown RBP19.4■□□□□ 0.7
GABPB1-212ENST00000615671 PCDHB12Q9Y5F1 795 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 A0A1W2PQC6 194 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 STRNO43815 780 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 ECSITQ9BQ95 431 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 MFSD1Q9H3U5 465 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 SETD4Q9NVD3 440 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 ZNF711Q9Y462 761 aa19.4■□□□□ 0.7
GABPB1-212ENST00000615671 EVPLLA8MZ36 301 aa19.39■□□□□ 0.7
GABPB1-212ENST00000615671 FAM107AO95990 144 aa19.39■□□□□ 0.7
GABPB1-212ENST00000615671 MRPS15P82914 257 aaKnown RBP19.39■□□□□ 0.7
GABPB1-212ENST00000615671 NBPF9Q3BBW0 867 aa19.39■□□□□ 0.7
GABPB1-212ENST00000615671 C16orf89Q6UX73 402 aa19.39■□□□□ 0.7
GABPB1-212ENST00000615671 TPST1O60507 370 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 AKAP5P24588 427 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 ALDH9A1P49189 494 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 BFSP2Q13515 415 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 TOMM20Q15388 145 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 TMED8Q6PL24 325 aaPredicted RBP19.39■□□□□ 0.69
GABPB1-212ENST00000615671 B3GALNT2Q8NCR0 500 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 SMPD4Q9NXE4 827 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 XPO1O14980 1071 aaKnown RBP19.39■□□□□ 0.69
GABPB1-212ENST00000615671 MSH4O15457 936 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 PARNO95453 639 aaKnown RBP19.39■□□□□ 0.69
GABPB1-212ENST00000615671 RHOCP08134 193 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 PNPLA4P41247 253 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 CTCFP49711 727 aaPredicted RBP19.39■□□□□ 0.69
GABPB1-212ENST00000615671 RHOAP61586 193 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 CNTN1Q12860 1018 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 CUL2Q13617 745 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 MAP1SQ66K74 1059 aaPredicted RBP19.39■□□□□ 0.69
GABPB1-212ENST00000615671 NAPEPLDQ6IQ20 393 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 ZNF34Q8IZ26 560 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 N6AMT1Q9Y5N5 214 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 SERPINB5P36952 375 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 RBM12Q9NTZ6 932 aaKnown RBP19.39■□□□□ 0.69
GABPB1-212ENST00000615671 RNF19AQ9NV58 838 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 PADI4Q9UM07 663 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 SUPT7LO94864 414 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 VSNL1P62760 191 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 SYDE1Q6ZW31 735 aaPredicted RBP19.39■□□□□ 0.69
GABPB1-212ENST00000615671 ZNF438Q7Z4V0 828 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 AKT1S1Q96B36 256 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 SNX12Q9UMY4 172 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 SPACA6W5XKT8 324 aa19.39■□□□□ 0.69
GABPB1-212ENST00000615671 VCLP18206 1134 aa19.38■□□□□ 0.69
GABPB1-212ENST00000615671 PCYT1AP49585 367 aa19.38■□□□□ 0.69
GABPB1-212ENST00000615671 SERPINB9P50453 376 aa19.38■□□□□ 0.69
GABPB1-212ENST00000615671 KYNUQ16719 465 aa19.38■□□□□ 0.69
GABPB1-212ENST00000615671 E4F1Q66K89 784 aaPredicted RBP19.38■□□□□ 0.69
GABPB1-212ENST00000615671 UGT3A1Q6NUS8 523 aa19.38■□□□□ 0.69
GABPB1-212ENST00000615671 USP49Q70CQ1 688 aa19.38■□□□□ 0.69
GABPB1-212ENST00000615671 FGD2Q7Z6J4 655 aa19.38■□□□□ 0.69
GABPB1-212ENST00000615671 KIAA2013Q8IYS2 634 aa19.38■□□□□ 0.69
GABPB1-212ENST00000615671 ARHGEF40Q8TER5 1519 aa19.38■□□□□ 0.69
GABPB1-212ENST00000615671 RAD51CO43502 376 aa19.38■□□□□ 0.69
GABPB1-212ENST00000615671 DAB1O75553 588 aa19.38■□□□□ 0.69
GABPB1-212ENST00000615671 ABCB1P08183 1280 aaPredicted RBP19.38■□□□□ 0.69
GABPB1-212ENST00000615671 RBP3P10745 1247 aa19.38■□□□□ 0.69
GABPB1-212ENST00000615671 ZNF284Q2VY69 593 aa19.38■□□□□ 0.69
GABPB1-212ENST00000615671 FICDQ9BVA6 458 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms