RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 PARD3BQ8TEW8 1205 aa24.28■■□□□ 1.48
FAM228B-208ENST00000613899 SPATA17Q96L03 361 aa24.28■■□□□ 1.48
FAM228B-208ENST00000613899 MRPL45Q9BRJ2 306 aaKnown RBP24.28■■□□□ 1.48
FAM228B-208ENST00000613899 LMAN1LQ9HAT1 526 aa24.28■■□□□ 1.48
FAM228B-208ENST00000613899 TDP1Q9NUW8 608 aa24.28■■□□□ 1.48
FAM228B-208ENST00000613899 DMAC2Q9NW81 257 aa24.28■■□□□ 1.48
FAM228B-208ENST00000613899 GTSE1Q9NYZ3 720 aa24.28■■□□□ 1.48
FAM228B-208ENST00000613899 PCDHGA2Q9Y5H1 932 aa24.28■■□□□ 1.48
FAM228B-208ENST00000613899 TRIM66O15016 1216 aa24.27■■□□□ 1.48
FAM228B-208ENST00000613899 ANXA13P27216 316 aa24.27■■□□□ 1.48
FAM228B-208ENST00000613899 SOX9P48436 509 aa24.27■■□□□ 1.48
FAM228B-208ENST00000613899 CASP4P49662 377 aa24.27■■□□□ 1.48
FAM228B-208ENST00000613899 CLDN10P78369 228 aa24.27■■□□□ 1.48
FAM228B-208ENST00000613899 ZNF268Q14587 947 aaPredicted RBP24.27■■□□□ 1.48
FAM228B-208ENST00000613899 MAMSTRQ6ZN01 415 aa24.27■■□□□ 1.48
FAM228B-208ENST00000613899 USP13Q92995 863 aaPredicted RBP24.27■■□□□ 1.48
FAM228B-208ENST00000613899 PCED1BQ96HM7 432 aa24.27■■□□□ 1.48
FAM228B-208ENST00000613899 XYLT2Q9H1B5 865 aa24.27■■□□□ 1.48
FAM228B-208ENST00000613899 VRTNQ9H8Y1 702 aa24.27■■□□□ 1.48
FAM228B-208ENST00000613899 ANAPC1Q9H1A4 1944 aa24.26■■□□□ 1.47
FAM228B-208ENST00000613899 LRRIQ3A6PVS8 624 aaPredicted RBP24.26■■□□□ 1.47
FAM228B-208ENST00000613899 CLSTN1O94985 981 aa24.26■■□□□ 1.47
FAM228B-208ENST00000613899 NR3C1P04150 777 aa24.26■■□□□ 1.47
FAM228B-208ENST00000613899 CHRNB1P11230 501 aa24.26■■□□□ 1.47
FAM228B-208ENST00000613899 BDNFP23560 247 aa24.26■■□□□ 1.47
FAM228B-208ENST00000613899 GRIK1P39086 918 aa24.26■■□□□ 1.47
FAM228B-208ENST00000613899 ZNF699Q32M78 642 aa24.26■■□□□ 1.47
FAM228B-208ENST00000613899 ITPRIPL2Q3MIP1 535 aa24.26■■□□□ 1.47
FAM228B-208ENST00000613899 MDH1BQ5I0G3 518 aa24.26■■□□□ 1.47
FAM228B-208ENST00000613899 TDRD10Q5VZ19 366 aaKnown RBP24.26■■□□□ 1.47
FAM228B-208ENST00000613899 PLEKHO2Q8TD55 490 aa24.26■■□□□ 1.47
FAM228B-208ENST00000613899 ATRIPQ8WXE1 791 aa24.26■■□□□ 1.47
FAM228B-208ENST00000613899 FAM126AQ9BYI3 521 aaPredicted RBP24.26■■□□□ 1.47
FAM228B-208ENST00000613899 ZSCAN32Q9NX65 697 aa24.26■■□□□ 1.47
FAM228B-208ENST00000613899 EHD2Q9NZN4 543 aa24.26■■□□□ 1.47
FAM228B-208ENST00000613899 NXF1Q9UBU9 619 aaKnown RBP24.26■■□□□ 1.47
FAM228B-208ENST00000613899 CCL26Q9Y258 94 aa24.26■■□□□ 1.47
FAM228B-208ENST00000613899 GVINP1Q7Z2Y8 2422 aa24.25■■□□□ 1.47
FAM228B-208ENST00000613899 CALUO43852 315 aaPredicted RBP24.25■■□□□ 1.47
FAM228B-208ENST00000613899 RHOBTB3O94955 611 aa24.25■■□□□ 1.47
FAM228B-208ENST00000613899 PRR29P0C7W0 189 aa24.25■■□□□ 1.47
FAM228B-208ENST00000613899 CCR3P51677 355 aa24.25■■□□□ 1.47
FAM228B-208ENST00000613899 TNK2Q07912 1038 aa24.25■■□□□ 1.47
FAM228B-208ENST00000613899 TXNDC11Q6PKC3 985 aa24.25■■□□□ 1.47
FAM228B-208ENST00000613899 KRBA2Q6ZNG9 492 aa24.25■■□□□ 1.47
FAM228B-208ENST00000613899 TTC8Q8TAM2 541 aa24.25■■□□□ 1.47
FAM228B-208ENST00000613899 CCDC34Q96HJ3 373 aa24.25■■□□□ 1.47
FAM228B-208ENST00000613899 TRPC7Q9HCX4 862 aa24.25■■□□□ 1.47
FAM228B-208ENST00000613899 FRMD4BQ9Y2L6 1034 aa24.25■■□□□ 1.47
FAM228B-208ENST00000613899 HELZP42694 1942 aaKnown RBP24.24■■□□□ 1.47
FAM228B-208ENST00000613899 TRAV19A0A0A6YYK7 116 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 A8MXQ7 604 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 USP17L7P0C7H9 530 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 PDE6CP51160 858 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 FAM160A1Q05DH4 1040 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 DPYDQ12882 1025 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 NCOA4Q13772 614 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 ZNF667Q5HYK9 610 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 DGKKQ5KSL6 1271 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 CC2D1AQ6P1N0 951 aaPredicted RBP24.24■■□□□ 1.47
FAM228B-208ENST00000613899 DENND5BQ6ZUT9 1274 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 ZBTB44Q8NCP5 570 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 NELL1Q92832 810 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 FAM83CQ9BQN1 747 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 ELOVL4Q9GZR5 314 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 GKN1Q9NS71 199 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 TRAF3IP3Q9Y228 551 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 NME7Q9Y5B8 376 aa24.24■■□□□ 1.47
FAM228B-208ENST00000613899 CKMP06732 381 aa24.23■■□□□ 1.47
FAM228B-208ENST00000613899 PTPN1P18031 435 aaKnown RBP24.23■■□□□ 1.47
FAM228B-208ENST00000613899 BECN1Q14457 450 aa24.23■■□□□ 1.47
FAM228B-208ENST00000613899 KCNB1Q14721 858 aa24.23■■□□□ 1.47
FAM228B-208ENST00000613899 CEP135Q66GS9 1140 aa24.23■■□□□ 1.47
FAM228B-208ENST00000613899 B3GALNT2Q8NCR0 500 aa24.23■■□□□ 1.47
FAM228B-208ENST00000613899 TMC2Q8TDI7 906 aa24.23■■□□□ 1.47
FAM228B-208ENST00000613899 C8orf48Q96LL4 319 aa24.23■■□□□ 1.47
FAM228B-208ENST00000613899 C4BPAP04003 597 aaKnown RBP24.22■■□□□ 1.47
FAM228B-208ENST00000613899 P4HA1P13674 534 aa24.22■■□□□ 1.47
FAM228B-208ENST00000613899 NRLP54845 237 aa24.22■■□□□ 1.47
FAM228B-208ENST00000613899 NOP14P78316 857 aaKnown RBP24.22■■□□□ 1.47
FAM228B-208ENST00000613899 RUNX3Q13761 415 aa24.22■■□□□ 1.47
FAM228B-208ENST00000613899 PON2Q15165 354 aa24.22■■□□□ 1.47
FAM228B-208ENST00000613899 PDGFRLQ15198 375 aa24.22■■□□□ 1.47
FAM228B-208ENST00000613899 TSSK4Q6SA08 328 aa24.22■■□□□ 1.47
FAM228B-208ENST00000613899 SPEM1Q8N4L4 309 aa24.22■■□□□ 1.47
FAM228B-208ENST00000613899 TTLL2Q9BWV7 592 aa24.22■■□□□ 1.47
FAM228B-208ENST00000613899 GOLPH3LQ9H4A5 285 aa24.22■■□□□ 1.47
FAM228B-208ENST00000613899 DPEP3Q9H4B8 488 aa24.22■■□□□ 1.47
FAM228B-208ENST00000613899 SMYD3Q9H7B4 428 aa24.22■■□□□ 1.47
FAM228B-208ENST00000613899 EP300Q09472 2414 aaPredicted RBP24.21■■□□□ 1.47
FAM228B-208ENST00000613899 ATP8B3O60423 1300 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 F8VP50 259 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 MAPK13O15264 365 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 ZNF202O95125 648 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 PFKLP17858 780 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 AMPD2Q01433 879 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 USP4Q13107 963 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 MTF1Q14872 753 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 NFIL3Q16649 462 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 ZACNQ401N2 412 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms