RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 TMEM237Q96Q45 408 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 HIPK3Q9H422 1215 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 KCNMB3Q9NPA1 279 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 RNF14Q9UBS8 474 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 PTCH2Q9Y6C5 1203 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 SLC4A7Q9Y6M7 1214 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 MYH15Q9Y2K3 1946 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 LACTBL1A8MY62 500 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 MGRN1O60291 552 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 NCAM1P13591 858 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 TARSP26639 723 aaKnown RBP11.35□□□□□ -0.59
FAM3A-221ENST00000612856 TPP2P29144 1249 aaPredicted RBP11.35□□□□□ -0.59
FAM3A-221ENST00000612856 TAF6P49848 677 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 RASSF2P50749 326 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 IRX4P78413 519 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.35□□□□□ -0.59
FAM3A-221ENST00000612856 DUSP28Q4G0W2 176 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 CTXN3Q4LDR2 81 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 TMEM119Q4V9L6 283 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 MIIPQ5JXC2 388 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 KLHDC7AQ5VTJ3 777 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 ETNPPLQ8TBG4 499 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 MIPOL1Q8TD10 442 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 LRRC8CQ8TDW0 803 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 CCT6BQ92526 530 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 TMEM117Q9H0C3 514 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.35□□□□□ -0.59
FAM3A-221ENST00000612856 NOC2LQ9Y3T9 749 aaKnown RBP11.35□□□□□ -0.59
FAM3A-221ENST00000612856 USP15Q9Y4E8 981 aaPredicted RBP11.35□□□□□ -0.59
FAM3A-221ENST00000612856 SLX4Q8IY92 1834 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 APC2O95996 2303 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 SPATA31C2B4DYI2 1134 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 ZNF263O14978 683 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 HMGCRP04035 888 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 ALDH2P05091 517 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 SKIP12755 728 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 CCND3P30281 292 aaPredicted RBP11.35□□□□□ -0.59
FAM3A-221ENST00000612856 COPS2P61201 443 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 SLC29A2Q14542 456 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 ANKRD23Q86SG2 305 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 PITPNM3Q9BZ71 974 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 SPTLC1O15269 473 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 RTN2O75298 545 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 DNAJC8O75937 253 aaPredicted RBP11.34□□□□□ -0.59
FAM3A-221ENST00000612856 CLK2P49760 499 aaKnown RBP11.34□□□□□ -0.59
FAM3A-221ENST00000612856 MAP3K7CLP57077 242 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 GPC5P78333 572 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 COG7P83436 770 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 KRT17Q04695 432 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 OLFML2BQ68BL8 750 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 GIPC2Q8TF65 315 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 SLC20A1Q8WUM9 679 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 PAWRQ96IZ0 340 aaKnown RBP11.34□□□□□ -0.59
FAM3A-221ENST00000612856 DDX50Q9BQ39 737 aaKnown RBP11.34□□□□□ -0.59
FAM3A-221ENST00000612856 BRWD1Q9NSI6 2320 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 GPATCH2LQ9NWQ4 482 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 CORO1CQ9ULV4 474 aaPredicted RBP11.34□□□□□ -0.59
FAM3A-221ENST00000612856 ZNF711Q9Y462 761 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 A0A087X0T9 212 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 HNRNPCP07910 306 aaKnown RBP eCLIP11.34□□□□□ -0.59
FAM3A-221ENST00000612856 FAM228BP0C875 321 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 DRD4P21917 467 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 ZBTB41Q5SVQ8 909 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 MOXD1Q6UVY6 613 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 RNF168Q8IYW5 571 aaPredicted RBP11.34□□□□□ -0.59
FAM3A-221ENST00000612856 SLC7A14Q8TBB6 771 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 ERP27Q96DN0 273 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 PABPC5Q96DU9 382 aaKnown RBP11.34□□□□□ -0.59
FAM3A-221ENST00000612856 HSD17B14Q9BPX1 270 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 MAP3K20Q9NYL2 800 aaKnown RBP11.34□□□□□ -0.59
FAM3A-221ENST00000612856 SALL4Q9UJQ4 1053 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 AGRPO00253 132 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 PMS2P54278 862 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 MTFR1Q15390 333 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 LONRF1Q17RB8 773 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 LRRC36Q1X8D7 754 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 C10orf120Q5SQS8 335 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 JADE1Q6IE81 842 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 C1orf186Q6ZWK4 172 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 SLC47A2Q86VL8 602 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 SRRM1Q8IYB3 904 aaKnown RBP11.34□□□□□ -0.59
FAM3A-221ENST00000612856 PGBD3Q8N328 593 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 ELMOD1Q8N336 334 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 USP38Q8NB14 1042 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 GPR20Q99678 358 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 AGPAT1Q99943 283 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 NIF3L1Q9GZT8 377 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 ISCUQ9H1K1 167 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 VCX3BQ9H321 246 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 VCX3AQ9NNX9 186 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.34□□□□□ -0.59
FAM3A-221ENST00000612856 HAO1Q9UJM8 370 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 NAV1Q8NEY1 1877 aa11.34□□□□□ -0.59
FAM3A-221ENST00000612856 PCNTO95613 3336 aa11.33□□□□□ -0.6
FAM3A-221ENST00000612856 A0A1B0GVG6 124 aa11.33□□□□□ -0.6
FAM3A-221ENST00000612856 LRRC10BA6NIK2 292 aa11.33□□□□□ -0.6
FAM3A-221ENST00000612856 TBXAS1P24557 533 aaPredicted RBP11.33□□□□□ -0.6
FAM3A-221ENST00000612856 RAB27AP51159 221 aa11.33□□□□□ -0.6
FAM3A-221ENST00000612856 DR1Q01658 176 aa11.33□□□□□ -0.6
FAM3A-221ENST00000612856 TLE2Q04725 743 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms