RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 STRA6Q9BX79 667 aa25.18■■□□□ 1.62
MMP28-203ENST00000612672 AGAP1Q9UPQ3 857 aa25.18■■□□□ 1.62
MMP28-203ENST00000612672 PLXND1Q9Y4D7 1925 aa25.18■■□□□ 1.62
MMP28-203ENST00000612672 GON4LQ3T8J9 2241 aa25.17■■□□□ 1.62
MMP28-203ENST00000612672 SLC26A4O43511 780 aa25.17■■□□□ 1.62
MMP28-203ENST00000612672 PI4KAP42356 2102 aa25.17■■□□□ 1.62
MMP28-203ENST00000612672 ZNF720Q7Z2F6 126 aa25.17■■□□□ 1.62
MMP28-203ENST00000612672 RASSF3Q86WH2 238 aa25.17■■□□□ 1.62
MMP28-203ENST00000612672 TSTD1Q8NFU3 115 aa25.17■■□□□ 1.62
MMP28-203ENST00000612672 POMGNT1Q8WZA1 660 aa25.17■■□□□ 1.62
MMP28-203ENST00000612672 LARP4BQ92615 738 aaKnown RBP25.17■■□□□ 1.62
MMP28-203ENST00000612672 ATP2A3Q93084 1043 aa25.17■■□□□ 1.62
MMP28-203ENST00000612672 SAAL1Q96ER3 474 aa25.17■■□□□ 1.62
MMP28-203ENST00000612672 ACBD6Q9BR61 282 aa25.17■■□□□ 1.62
MMP28-203ENST00000612672 TMEM206Q9H813 350 aa25.17■■□□□ 1.62
MMP28-203ENST00000612672 ABCB6Q9NP58 842 aa25.17■■□□□ 1.62
MMP28-203ENST00000612672 ADAMTS9Q9P2N4 1935 aa25.17■■□□□ 1.62
MMP28-203ENST00000612672 TRAV19A0A0A6YYK7 116 aa25.16■■□□□ 1.62
MMP28-203ENST00000612672 USP17L7P0C7H9 530 aa25.16■■□□□ 1.62
MMP28-203ENST00000612672 TFAMQ00059 246 aaKnown RBP25.16■■□□□ 1.62
MMP28-203ENST00000612672 SLFN12LQ6IEE8 588 aa25.16■■□□□ 1.62
MMP28-203ENST00000612672 ANO7Q6IWH7 933 aa25.16■■□□□ 1.62
MMP28-203ENST00000612672 USP49Q70CQ1 688 aa25.16■■□□□ 1.62
MMP28-203ENST00000612672 MDGA1Q8NFP4 955 aa25.16■■□□□ 1.62
MMP28-203ENST00000612672 FAM213AQ9BRX8 229 aa25.16■■□□□ 1.62
MMP28-203ENST00000612672 UXTQ9UBK9 157 aaPredicted RBP25.16■■□□□ 1.62
MMP28-203ENST00000612672 SIX4Q9UIU6 781 aa25.16■■□□□ 1.62
MMP28-203ENST00000612672 ATP2C2O75185 946 aa25.15■■□□□ 1.62
MMP28-203ENST00000612672 IL18RAPO95256 599 aa25.15■■□□□ 1.62
MMP28-203ENST00000612672 CD2BP2O95400 341 aaKnown RBP25.15■■□□□ 1.62
MMP28-203ENST00000612672 GJB2P29033 226 aa25.15■■□□□ 1.62
MMP28-203ENST00000612672 RPL10AP62906 217 aaKnown RBP25.15■■□□□ 1.62
MMP28-203ENST00000612672 POU5F1Q01860 360 aaKnown RBP25.15■■□□□ 1.62
MMP28-203ENST00000612672 C2orf27AQ580R0 203 aa25.15■■□□□ 1.62
MMP28-203ENST00000612672 DYMQ7RTS9 669 aa25.15■■□□□ 1.62
MMP28-203ENST00000612672 BRSK2Q8IWQ3 736 aa25.15■■□□□ 1.62
MMP28-203ENST00000612672 FGFBP2Q9BYJ0 223 aa25.15■■□□□ 1.62
MMP28-203ENST00000612672 PNPLA4P41247 253 aa25.14■■□□□ 1.62
MMP28-203ENST00000612672 CASP5P51878 434 aa25.14■■□□□ 1.62
MMP28-203ENST00000612672 USP46P62068 366 aa25.14■■□□□ 1.62
MMP28-203ENST00000612672 IRX4P78413 519 aa25.14■■□□□ 1.62
MMP28-203ENST00000612672 CFAP221Q4G0U5 840 aa25.14■■□□□ 1.62
MMP28-203ENST00000612672 TMEM92Q6UXU6 159 aa25.14■■□□□ 1.62
MMP28-203ENST00000612672 NT5DC4Q86YG4 428 aa25.14■■□□□ 1.62
MMP28-203ENST00000612672 SCN4BQ8IWT1 228 aa25.14■■□□□ 1.62
MMP28-203ENST00000612672 CCDC33Q8N5R6 958 aa25.14■■□□□ 1.62
MMP28-203ENST00000612672 FRMD1Q8N878 549 aa25.14■■□□□ 1.62
MMP28-203ENST00000612672 KDF1Q8NAX2 398 aaPredicted RBP25.14■■□□□ 1.62
MMP28-203ENST00000612672 TMEM9BQ9NQ34 198 aa25.14■■□□□ 1.62
MMP28-203ENST00000612672 CEP192Q8TEP8 1941 aa25.14■■□□□ 1.61
MMP28-203ENST00000612672 PTPRJQ12913 1337 aa25.13■■□□□ 1.61
MMP28-203ENST00000612672 MYO18AQ92614 2054 aaKnown RBP25.13■■□□□ 1.61
MMP28-203ENST00000612672 GABRDO14764 452 aa25.13■■□□□ 1.61
MMP28-203ENST00000612672 SCAMP3O14828 347 aaKnown RBP25.13■■□□□ 1.61
MMP28-203ENST00000612672 TCF3P15923 654 aa25.13■■□□□ 1.61
MMP28-203ENST00000612672 CYP2U1Q7Z449 544 aa25.13■■□□□ 1.61
MMP28-203ENST00000612672 GATA6Q92908 595 aa25.13■■□□□ 1.61
MMP28-203ENST00000612672 CNOT6LQ96LI5 555 aaKnown RBP25.13■■□□□ 1.61
MMP28-203ENST00000612672 ADAM33Q9BZ11 813 aa25.13■■□□□ 1.61
MMP28-203ENST00000612672 TBC1D7Q9P0N9 293 aa25.13■■□□□ 1.61
MMP28-203ENST00000612672 MMP17Q9ULZ9 603 aa25.13■■□□□ 1.61
MMP28-203ENST00000612672 ARHGAP26Q9UNA1 814 aa25.13■■□□□ 1.61
MMP28-203ENST00000612672 SNX9Q9Y5X1 595 aa25.13■■□□□ 1.61
MMP28-203ENST00000612672 PCNX2A6NKB5 2137 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 LOC400499M0QZD8 3231 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 GOLGA8IPA6NC78 632 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 GOLGA8JA6NMD2 632 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 TULP1O00294 542 aaPredicted RBP25.12■■□□□ 1.61
MMP28-203ENST00000612672 HUS1O60921 280 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 PSMC1P62191 440 aaKnown RBP25.12■■□□□ 1.61
MMP28-203ENST00000612672 MYL7Q01449 175 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 SOWAHAQ2M3V2 549 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 DAB2IPQ5VWQ8 1189 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 LMBRD2Q68DH5 695 aaPredicted RBP25.12■■□□□ 1.61
MMP28-203ENST00000612672 ADGRF2Q8IZF7 708 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 DEFB124Q8NES8 71 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 OLIG1Q8TAK6 271 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 KBTBD7Q8WVZ9 684 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 RLN3Q8WXF3 142 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 EPSTI1Q96J88 318 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 ZDHHC4Q9NPG8 344 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 CRTAC1Q9NQ79 661 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 GDAP2Q9NXN4 497 aa25.12■■□□□ 1.61
MMP28-203ENST00000612672 SMG1Q96Q15 3661 aaKnown RBP25.12■■□□□ 1.61
MMP28-203ENST00000612672 KHNYNO15037 678 aaKnown RBP25.11■■□□□ 1.61
MMP28-203ENST00000612672 CYP17A1P05093 508 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 LMO2P25791 158 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 ABCD1P33897 745 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 LONP1P36776 959 aaKnown RBP25.11■■□□□ 1.61
MMP28-203ENST00000612672 USP39Q53GS9 565 aaKnown RBP25.11■■□□□ 1.61
MMP28-203ENST00000612672 FAM171BQ6P995 826 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 C12orf40Q86WS4 652 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 SPATA2LQ8IUW3 424 aaPredicted RBP25.11■■□□□ 1.61
MMP28-203ENST00000612672 TMEM86AQ8N2M4 240 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 CSGALNACT2Q8N6G5 542 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 LRRC52Q8N7C0 313 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 RASSF8Q8NHQ8 419 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 MYLPFQ96A32 169 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 HVCN1Q96D96 273 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 DNAJC19Q96DA6 116 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms