RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 PORCNQ9H237 461 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 MANSC1Q9H8J5 431 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 NDE1Q9NXR1 346 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 TADA2AO75478 443 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 B3GAT3O94766 335 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 RECQLP46063 649 aaPredicted RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 BCAT1P54687 386 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 MARSP56192 900 aaKnown RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 ESRRGP62508 458 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 ANO4Q32M45 955 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 C9orf131Q5VYM1 1079 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 RGS9BPQ6ZS82 235 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 FRA10AC1Q70Z53 315 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 PIP4K2CQ8TBX8 421 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 SHC3Q92529 594 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 FGD4Q96M96 766 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 TRIM4Q9C037 500 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 ASB7Q9H672 318 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 DNAJC18Q9H819 358 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 PCDH9Q9HC56 1237 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 ZFYVE28Q9HCC9 887 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 ADA2Q9NZK5 511 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 VAV3Q9UKW4 847 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 SLC8A2Q9UPR5 921 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 MTO1Q9Y2Z2 717 aaKnown RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 NVLO15381 856 aaKnown RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 PPFIA2O75334 1257 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 CELF2O95319 508 aaKnown RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 MCF2P10911 925 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 MFSD7Q6UXD7 560 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 SLC26A7Q8TE54 656 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 PTPRN2Q92932 1015 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 FAM111AQ96PZ2 611 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 PURBQ96QR8 312 aaKnown RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 FGFBP2Q9BYJ0 223 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 ASCC2Q9H1I8 757 aaPredicted RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 SUDS3Q9H7L9 328 aaPredicted RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 C20orf96Q9NUD7 363 aaPredicted RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 CYP39A1Q9NYL5 469 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 FZD1Q9UP38 647 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 GSTA4O15217 222 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 ZBTB24O43167 697 aaPredicted RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 RIPK2O43353 540 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 AP1G2O75843 785 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 UBA1P22314 1058 aaKnown RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 NFKBIAP25963 317 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 PPATQ06203 517 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 BIRC2Q13490 618 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 CUL3Q13618 768 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 VEPH1Q14D04 833 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 HABP4Q5JVS0 413 aaKnown RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 FAM131BQ86XD5 332 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 ARID3BQ8IVW6 561 aaPredicted RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 FAM71AQ8IYT1 594 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 ARMC2Q8NEN0 867 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 OPTNQ96CV9 577 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 INPP4AQ96PE3 977 aaPredicted RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 OSMRQ99650 979 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 HAUS8Q9BT25 410 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 HSD3B7Q9H2F3 369 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 MRPL40Q9NQ50 206 aaKnown RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 SHOC2Q9UQ13 582 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 E5RI56 91 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 GRIN3BO60391 1043 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 PDHA1P08559 390 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 EPHX2P34913 555 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 SERPINB4P48594 390 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 ERFP50548 548 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 CDH8P55286 799 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 IL1RL1Q01638 556 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 HIC1Q14526 733 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 EFTUD2Q15029 972 aaKnown RBP eCLIP8.94□□□□□ -0.984e-8■□□□□ 8.3
TMCO1-208ENST00000612311 MDH1BQ5I0G3 518 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 TMTC4Q5T4D3 741 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 NAPEPLDQ6IQ20 393 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 IPMKQ8NFU5 416 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 ZBTB18Q99592 522 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 FAM167BQ9BTA0 163 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 SLC40A1Q9NP59 571 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 THEGQ9P2T0 379 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 BARX2Q9UMQ3 279 aaPredicted RBP8.94□□□□□ -0.98
TMCO1-208ENST00000612311 C17orf102A2RUQ5 167 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 BTNL10A8MVZ5 291 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 F8W8V4 182 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 FDFT1P37268 417 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 ZNF268Q14587 947 aaPredicted RBP8.94□□□□□ -0.98
TMCO1-208ENST00000612311 LONP2Q86WA8 852 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 ST13P4Q8IZP2 240 aaPredicted RBP8.94□□□□□ -0.98
TMCO1-208ENST00000612311 TASP1Q9H6P5 420 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 CATSPERBQ9H7T0 1116 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 CACYBPQ9HB71 228 aaKnown RBP8.94□□□□□ -0.98
TMCO1-208ENST00000612311 NAALADL1Q9UQQ1 740 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 RPS6KL1Q9Y6S9 549 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 HMBSP08397 361 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 MYBL2P10244 700 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 GLRA2P23416 452 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 NDST1P52848 882 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 FBXO47Q5MNV8 452 aa8.94□□□□□ -0.98
TMCO1-208ENST00000612311 CATSPERGQ6ZRH7 1159 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms