RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 PRELID2Q8N945 189 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 IFT43Q96FT9 208 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 APOPT1Q96IL0 206 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 TAS2R14Q9NYV8 317 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 KIAA1257Q9ULG3 409 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 EEF2KO00418 725 aaKnown RBP11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 HSD17B4P51659 736 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 PRAMEP78395 509 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 Q3C1V9 767 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 LCA5Q86VQ0 697 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 TMPRSS6Q8IU80 811 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 CHST13Q8NET6 341 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 RBM46Q8TBY0 533 aaKnown RBP11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 ACTL9Q8TC94 416 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 PARD3BQ8TEW8 1205 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 SKA2Q8WVK7 121 aaPredicted RBP11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 TMA16Q96EY4 203 aaKnown RBP11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 TSPAN17Q96FV3 270 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 NAT9Q9BTE0 207 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 KIF9Q9HAQ2 790 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 CHST7Q9NS84 486 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 KRT82Q9NSB4 513 aa11.36□□□□□ -0.59
CDC42EP3-206ENST00000611976 AGPSO00116 658 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 GNAT1P11488 350 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 BGNP21810 368 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 AQP5P55064 265 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 CDC42EP1Q00587 391 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 SLC34A1Q06495 639 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 UBA3Q8TBC4 463 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 TFB1MQ8WVM0 346 aaKnown RBP11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 MKL1Q969V6 931 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 WARS2Q9UGM6 360 aaKnown RBP11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 DTNAQ9Y4J8 743 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 UNC5CO95185 931 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 SUPT20HL2P0C7V6 817 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 KCNA1Q09470 495 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 ZCWPW2Q504Y3 356 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 MAP4K3Q8IVH8 894 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 HPDLQ96IR7 371 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 SIKE1Q9BRV8 207 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 MTMR12Q9C0I1 747 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 TMEM39BQ9GZU3 492 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 DDX4Q9NQI0 724 aaKnown RBP11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 LMO7Q8WWI1 1683 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 SRP72O76094 671 aaKnown RBP11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 VDRP11473 427 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 GYS1P13807 737 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 GRK2P25098 689 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 CHRNA5P30532 468 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 PPM1FP49593 454 aaPredicted RBP11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 RHBDL3P58872 404 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 FLOT2Q14254 428 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 PKN2Q16513 984 aaKnown RBP11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 KCNT1Q5JUK3 1230 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 EFHC1Q5JVL4 640 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 TWF2Q6IBS0 349 aaKnown RBP11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 APPL2Q8NEU8 664 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 TCP10LQ8TDR4 215 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 ZNF75CPQ92670 426 aaPredicted RBP11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 AGAP3Q96P47 875 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 BCL9LQ86UU0 1499 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 ANGPT2O15123 496 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 TXNP10599 105 aaKnown RBP11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 ARHGDIAP52565 204 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 SLC45A4Q5BKX6 768 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 TMCO4Q5TGY1 634 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 ATG4CQ96DT6 458 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 MMADHCQ9H3L0 296 aaPredicted RBP11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 C20orf96Q9NUD7 363 aaPredicted RBP11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 CYP39A1Q9NYL5 469 aa11.35□□□□□ -0.59
CDC42EP3-206ENST00000611976 TLR2O60603 784 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 SERPINB3P29508 390 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 HDAC4P56524 1084 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 TSPY1Q01534 308 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 GRM1Q13255 1194 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 CYLC2Q14093 348 aaPredicted RBP11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 FRA10AC1Q70Z53 315 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 FAM71AQ8IYT1 594 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 CNPY3Q9BT09 278 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 CISHQ9NSE2 258 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 USP18Q9UMW8 372 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 LOC100653049A0A140TA62 436 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 ATP9AO75110 1047 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 KRT34O76011 436 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 THRAP10827 490 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 PPP3CAQ08209 521 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 AADACL2Q6P093 401 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 PCYOX1LQ8NBM8 494 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 ETNPPLQ8TBG4 499 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 PTPRN2Q92932 1015 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 PPP1R36Q96LQ0 422 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 TMEM237Q96Q45 408 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 PXMP2Q9NR77 195 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 CHD2O14647 1828 aaKnown RBP11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 TRPC5OSA6NMA1 111 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 F8W8V4 182 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 E2F6O75461 281 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 EPHB2P29323 1055 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 SNX30Q5VWJ9 437 aa11.34□□□□□ -0.59
CDC42EP3-206ENST00000611976 RNF135Q8IUD6 432 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms