RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 PNMA3Q9UL41 463 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 APOBEC2Q9Y235 224 aaKnown RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 UMODL1Q5DID0 1318 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 C4BPAP04003 597 aaKnown RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 ENO1P06733 434 aaKnown RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 KCNA2P16389 499 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 PGM1P36871 562 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 ARL1P40616 181 aaPredicted RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 GCLCP48506 637 aaPredicted RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 MTFR1Q15390 333 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 GOLGA7BQ2TAP0 167 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 MROH9Q5TGP6 573 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 DENND1BQ6P3S1 775 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 MTDHQ86UE4 582 aaKnown RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 FBXO16Q8IX29 292 aaPredicted RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 HACE1Q8IYU2 909 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 NDUFAF2Q8N183 169 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 CCDC33Q8N5R6 958 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 C12orf50Q8NA57 414 aaPredicted RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 HIPK4Q8NE63 616 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 TCP10LQ8TDR4 215 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 TMEM176AQ96HP8 235 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 NTPCRQ9BSD7 190 aaKnown RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 WWP1Q9H0M0 922 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 DOCK2Q92608 1830 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 NFASCO94856 1347 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 A0A0B4J269 797 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 ASB14A6NK59 587 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 HUS1O60921 280 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 BANF1O75531 89 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 VDRP11473 427 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 ZFXP17010 805 aaPredicted RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 MMP8P22894 467 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 RPA3P35244 121 aaPredicted RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 ELK3P41970 407 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 TGFB2P61812 414 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 TMEM62Q0P6H9 643 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 MON1BQ7L1V2 547 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 ARMC2Q8NEN0 867 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 PRCCQ92733 491 aaPredicted RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 SLC10A4Q96EP9 437 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 TMEM237Q96Q45 408 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 CNPY3Q9BT09 278 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 FRMD8P1Q9BZ68 369 aaPredicted RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 TMEM134Q9H6X4 195 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 SMYD3Q9H7B4 428 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 KIF9Q9HAQ2 790 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 SLC5A4Q9NY91 659 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 TLK1Q9UKI8 766 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 AHDC1Q5TGY3 1603 aaPredicted RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 ZNF536O15090 1300 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 DDX60Q8IY21 1712 aaKnown RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 BCORQ6W2J9 1755 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 MAGEB2O15479 319 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 HNRNPCL1O60812 293 aaKnown RBP9.06□□□□□ -0.96
LIG4-204ENST00000611712 TGFB3P10600 412 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 UNGP13051 313 aaPredicted RBP9.06□□□□□ -0.96
LIG4-204ENST00000611712 ADRA1DP25100 572 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 TYK2P29597 1187 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 MIPP30301 263 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 CPA2P48052 419 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 NME3Q13232 169 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 STILQ15468 1287 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 TAF1BQ53T94 588 aaPredicted RBP9.06□□□□□ -0.96
LIG4-204ENST00000611712 LRRC38Q5VT99 294 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 C1orf146Q5VVC0 180 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 PLEKHA7Q6IQ23 1121 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 KIRREL3Q8IZU9 778 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 ALLCQ8N6M5 410 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 SPATC1LQ9H0A9 340 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 VPS33BQ9H267 617 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 SLCO1B3Q9NPD5 702 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 ANGPTL2Q9UKU9 493 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 MTO1Q9Y2Z2 717 aaKnown RBP9.06□□□□□ -0.96
LIG4-204ENST00000611712 TMEM191CA6NGB0 347 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 PMM2O15305 246 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 SMIM24O75264 130 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 SLC25A27O95847 323 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 ASS1P00966 412 aaKnown RBP9.06□□□□□ -0.96
LIG4-204ENST00000611712 CST3P01034 146 aaPredicted RBP9.06□□□□□ -0.96
LIG4-204ENST00000611712 PSMC4P43686 418 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 ALDH18A1P54886 795 aaKnown RBP9.06□□□□□ -0.96
LIG4-204ENST00000611712 ASPHQ12797 758 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 KYAT1Q16773 422 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 CATSPERGQ6ZRH7 1159 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 PID1Q7Z2X4 250 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 ACOT1Q86TX2 421 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 ARID3BQ8IVW6 561 aaPredicted RBP9.06□□□□□ -0.96
LIG4-204ENST00000611712 SLC16A10Q8TF71 515 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 ATXN7L3BQ96GX2 97 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 TTC1Q99614 292 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 VCX3BQ9H321 246 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 SCOCQ9UIL1 159 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 DRG1Q9Y295 367 aaKnown RBP9.06□□□□□ -0.96
LIG4-204ENST00000611712 A0A087WZ62 844 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 ACKR2O00590 384 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 ONECUT3O60422 494 aaPredicted RBP9.06□□□□□ -0.96
LIG4-204ENST00000611712 OPHN1O60890 802 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 PYGBP11216 843 aa9.06□□□□□ -0.96
LIG4-204ENST00000611712 EPHB1P54762 984 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms