RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 SGPL1O95470 568 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 ASLP04424 464 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 ITGA2BP08514 1039 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 MYL3P08590 195 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 TARSP26639 723 aaKnown RBP16.78■□□□□ 0.28
RTN1-209ENST00000611068 EPHB2P29323 1055 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 SLCO1A2P46721 670 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 SNRPFP62306 86 aaKnown RBP16.78■□□□□ 0.28
RTN1-209ENST00000611068 TRIM32Q13049 653 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 PRPF4BQ13523 1007 aaKnown RBP16.78■□□□□ 0.28
RTN1-209ENST00000611068 MARCH8Q5T0T0 291 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 MEI1Q5TIA1 1274 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 TDRD10Q5VZ19 366 aaKnown RBP16.78■□□□□ 0.28
RTN1-209ENST00000611068 IQSEC1Q6DN90 963 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 HOOK3Q86VS8 718 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 MRPL4Q9BYD3 311 aaKnown RBP16.78■□□□□ 0.28
RTN1-209ENST00000611068 PAIP2BQ9ULR5 123 aaKnown RBP16.78■□□□□ 0.28
RTN1-209ENST00000611068 A6NJR5 290 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 KCNK3O14649 394 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 ZNF865P0CJ78 1059 aaPredicted RBP16.78■□□□□ 0.28
RTN1-209ENST00000611068 ITGA4P13612 1032 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 SLC26A2P50443 739 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 HIC1Q14526 733 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 PARP6Q2NL67 630 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 SNX30Q5VWJ9 437 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 SLC47A2Q86VL8 602 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 BRD8Q9H0E9 1235 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 PCDH18Q9HCL0 1135 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 PDP2Q9P2J9 529 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 PRKAG3Q9UGI9 489 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 HAO1Q9UJM8 370 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 NAGPAQ9UK23 515 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 GJD2Q9UKL4 321 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 RGS16O15492 202 aaPredicted RBP16.77■□□□□ 0.28
RTN1-209ENST00000611068 TTI1O43156 1089 aa16.77■□□□□ 0.28
RTN1-209ENST00000611068 SKIP12755 728 aa16.77■□□□□ 0.28
RTN1-209ENST00000611068 KRT5P13647 590 aa16.77■□□□□ 0.28
RTN1-209ENST00000611068 VARSP26640 1264 aaKnown RBP16.77■□□□□ 0.28
RTN1-209ENST00000611068 VHLP40337 213 aa16.77■□□□□ 0.28
RTN1-209ENST00000611068 ZNF568Q3ZCX4 644 aa16.77■□□□□ 0.28
RTN1-209ENST00000611068 ECHDC2Q86YB7 292 aa16.77■□□□□ 0.28
RTN1-209ENST00000611068 SLC15A3Q8IY34 581 aa16.77■□□□□ 0.28
RTN1-209ENST00000611068 TMEM134Q9H6X4 195 aa16.77■□□□□ 0.28
RTN1-209ENST00000611068 CDHR5Q9HBB8 845 aa16.77■□□□□ 0.28
RTN1-209ENST00000611068 NAT1P18440 290 aa16.77■□□□□ 0.27
RTN1-209ENST00000611068 PIK3CAP42336 1068 aa16.77■□□□□ 0.27
RTN1-209ENST00000611068 HTRA3P83110 453 aa16.77■□□□□ 0.27
RTN1-209ENST00000611068 MBTD1Q05BQ5 628 aa16.77■□□□□ 0.27
RTN1-209ENST00000611068 KHDC1Q4VXA5 237 aaKnown RBP16.77■□□□□ 0.27
RTN1-209ENST00000611068 ATF7IP2Q5U623 682 aa16.77■□□□□ 0.27
RTN1-209ENST00000611068 CGB2Q6NT52 195 aa16.77■□□□□ 0.27
RTN1-209ENST00000611068 LRRC8CQ8TDW0 803 aa16.77■□□□□ 0.27
RTN1-209ENST00000611068 PGM2Q96G03 612 aa16.77■□□□□ 0.27
RTN1-209ENST00000611068 LRMDAQ9H2I8 198 aa16.77■□□□□ 0.27
RTN1-209ENST00000611068 FAM114A2Q9NRY5 505 aa16.77■□□□□ 0.27
RTN1-209ENST00000611068 MYADML2A6NDP7 307 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 MAGEB3O15480 346 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 TOM1L1O75674 476 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 SKIV2L2P42285 1042 aaKnown RBP16.76■□□□□ 0.27
RTN1-209ENST00000611068 EFNA5P52803 228 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 EIF3BP55884 814 aaKnown RBP16.76■□□□□ 0.27
RTN1-209ENST00000611068 SLFN12LQ6IEE8 588 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 OLFML1Q6UWY5 402 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 TMC2Q8TDI7 906 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 RNF25Q96BH1 459 aaPredicted RBP16.76■□□□□ 0.27
RTN1-209ENST00000611068 DNAJC1Q96KC8 554 aaKnown RBP16.76■□□□□ 0.27
RTN1-209ENST00000611068 COMMD3-BMI1R4GMX3 469 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 UMODL1Q5DID0 1318 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 TMEM88BA6NKF7 163 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 O00370 1275 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 CEP104O60308 925 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 CST3P01034 146 aaPredicted RBP16.76■□□□□ 0.27
RTN1-209ENST00000611068 HLA-DRAP01903 254 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 PTENP60484 403 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 TFAMQ00059 246 aaKnown RBP16.76■□□□□ 0.27
RTN1-209ENST00000611068 ZNF484Q5JVG2 852 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 PHLDB2Q86SQ0 1253 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 CYP4X1Q8N118 509 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 HELQQ8TDG4 1101 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 FAM81BQ96LP2 452 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 TBC1D10AQ9BXI6 508 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 TXLNGYQ9BZA5 131 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 MTMR12Q9C0I1 747 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 MYLK2Q9H1R3 596 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 GNEQ9Y223 722 aaKnown RBP16.76■□□□□ 0.27
RTN1-209ENST00000611068 DAAM1Q9Y4D1 1078 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 STYXL1Q9Y6J8 313 aa16.76■□□□□ 0.27
RTN1-209ENST00000611068 ZSWIM8A7E2V4 1837 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 MAPK13O15264 365 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 VNN1O95497 513 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 PGK1P00558 417 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 TFDP1Q14186 410 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 PSMD6Q15008 389 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 LIN52Q52LA3 116 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 ARHGAP18Q8N392 663 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 EPS8L3Q8TE67 593 aaKnown RBP16.75■□□□□ 0.27
RTN1-209ENST00000611068 WDR60Q8WVS4 1066 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 NT5C1BQ96P26 610 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 TRIM51Q9BSJ1 452 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 GPR25O00155 361 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms