RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TTC4O95801 387 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 CYP2B6P20813 491 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 AKAP5P24588 427 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 CDR1P51861 262 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 VCPP55072 806 aaKnown RBP14.32□□□□□ -0.12
NEK3-205ENST00000610828 TAF1CQ15572 869 aaPredicted RBP14.32□□□□□ -0.12
NEK3-205ENST00000610828 OR6B2Q6IFH4 312 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 SRLQ86TD4 932 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 ACOT1Q86TX2 421 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 BEST2Q8NFU1 509 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 MDM1Q8TC05 714 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 CCHCR1Q8TD31 782 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 HSPH1Q92598 858 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 TMEM121Q9BTD3 319 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 FAM107BQ9H098 131 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 FAM124BQ9H5Z6 455 aaPredicted RBP14.32□□□□□ -0.12
NEK3-205ENST00000610828 PIN4Q9Y237 131 aaKnown RBP14.32□□□□□ -0.12
NEK3-205ENST00000610828 RRP15Q9Y3B9 282 aaKnown RBP14.32□□□□□ -0.12
NEK3-205ENST00000610828 ZNF236Q9UL36 1845 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 SGK1O00141 431 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 TREHO43280 583 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 CST8O60676 142 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 AGTP01019 485 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 IFNB1P01574 187 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 MYL3P08590 195 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 CD48P09326 243 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 KDELR1P24390 212 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 MIPP30301 263 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 RGS7P49802 495 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 ZNF200P98182 395 aaPredicted RBP14.31□□□□□ -0.12
NEK3-205ENST00000610828 BEX3Q00994 111 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 OASLQ15646 514 aaKnown RBP14.31□□□□□ -0.12
NEK3-205ENST00000610828 GOLGA7BQ2TAP0 167 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 PPP1R26Q5T8A7 1209 aaPredicted RBP14.31□□□□□ -0.12
NEK3-205ENST00000610828 HIBCHQ6NVY1 386 aaPredicted RBP14.31□□□□□ -0.12
NEK3-205ENST00000610828 FAM183BPQ6ZVS7 135 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 NLRP14Q86W24 1093 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 KCTD6Q8NC69 237 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 TMEM40Q8WWA1 233 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 PIWIL1Q96J94 861 aaKnown RBP14.31□□□□□ -0.12
NEK3-205ENST00000610828 SELENOSQ9BQE4 189 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 CNOT10Q9H9A5 744 aaKnown RBP14.31□□□□□ -0.12
NEK3-205ENST00000610828 FAM49BQ9NUQ9 324 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 USP18Q9UMW8 372 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 DRG1Q9Y295 367 aaKnown RBP14.31□□□□□ -0.12
NEK3-205ENST00000610828 GRAP2O75791 330 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 PSEN2P49810 448 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 GPS1Q13098 491 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 AUHQ13825 339 aaKnown RBP14.31□□□□□ -0.12
NEK3-205ENST00000610828 TAF5Q15542 800 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 ROPN1BQ9BZX4 212 aaPredicted RBP14.31□□□□□ -0.12
NEK3-205ENST00000610828 ROPN1Q9HAT0 212 aaPredicted RBP14.31□□□□□ -0.12
NEK3-205ENST00000610828 ASNSD1Q9NWL6 643 aa14.31□□□□□ -0.12
NEK3-205ENST00000610828 DNALI1O14645 258 aaPredicted RBP14.3□□□□□ -0.12
NEK3-205ENST00000610828 ITGAVP06756 1048 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 PFKMP08237 780 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 PDGFRAP16234 1089 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 CPT1AP50416 773 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 ZNF157P51786 506 aaPredicted RBP14.3□□□□□ -0.12
NEK3-205ENST00000610828 ZNF143P52747 638 aaPredicted RBP14.3□□□□□ -0.12
NEK3-205ENST00000610828 OTUD4Q01804 1114 aaKnown RBP14.3□□□□□ -0.12
NEK3-205ENST00000610828 ACAP1Q15027 740 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 PCBP1Q15365 356 aaKnown RBP eCLIP14.3□□□□□ -0.12
NEK3-205ENST00000610828 STILQ15468 1287 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 ZBTB6Q15916 424 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 CDO1Q16878 200 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 SH3PXD2AQ5TCZ1 1133 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 MYCBPAPQ8TBZ2 947 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 ACTL9Q8TC94 416 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 NKD2Q969F2 451 aaPredicted RBP14.3□□□□□ -0.12
NEK3-205ENST00000610828 CCT8L2Q96SF2 557 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 RBM15Q96T37 977 aaKnown RBP eCLIP14.3□□□□□ -0.12
NEK3-205ENST00000610828 CALN1Q9BXU9 219 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 STMN4Q9H169 189 aaPredicted RBP14.3□□□□□ -0.12
NEK3-205ENST00000610828 ADAM7Q9H2U9 754 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 NINJ2Q9NZG7 142 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 KLK14Q9P0G3 267 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 EFR3BQ9Y2G0 817 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 RALGAPA2Q2PPJ7 1873 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 TULP2O00295 520 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 GPD1P21695 349 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 SNX17Q15036 470 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 OR6B3Q8NGW1 331 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 ZNF473Q8WTR7 871 aaKnown RBP14.3□□□□□ -0.12
NEK3-205ENST00000610828 RXFP2Q8WXD0 754 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 C9orf72Q96LT7 481 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 MIS12Q9H081 205 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 AP5M1Q9H0R1 490 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 CNTN3Q9P232 1028 aa14.3□□□□□ -0.12
NEK3-205ENST00000610828 C2CD4BA6NLJ0 364 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 ANKRD65E5RJM6 399 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 TRAPPC3O43617 180 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 TRUB2O95900 331 aaKnown RBP14.29□□□□□ -0.12
NEK3-205ENST00000610828 FAM107AO95990 144 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 MMP13P45452 471 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 ADAM17P78536 824 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 C15orf59Q2T9L4 293 aaPredicted RBP14.29□□□□□ -0.12
NEK3-205ENST00000610828 CCDC38Q502W7 563 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 C9orf57Q5W0N0 161 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 MFSD5Q6N075 450 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms