RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 SHOC2Q9UQ13 582 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 COL4A3Q01955 1670 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 ABHD14A-ACY1A0A1B0GW23 586 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 A0A1W2PPC4 97 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 MYADML2A6NDP7 307 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 THAP12O43422 761 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 LPXNO60711 386 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 FGF18O76093 207 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 ZFPL1O95159 310 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 TXNP10599 105 aaKnown RBP5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 IL1R1P14778 569 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 FGFR2P21802 821 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 DDX6P26196 483 aaKnown RBP eCLIP5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 LILRA4P59901 499 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 PMS2P11Q13670 270 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 CYP2A13Q16696 494 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 GEN1Q17RS7 908 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 CD300EQ496F6 205 aaPredicted RBP5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 C10orf62Q5T681 223 aaPredicted RBP5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 ZDHHC24Q6UX98 284 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 RNF44Q7L0R7 432 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 GAS2L3Q86XJ1 694 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 YAF2Q8IY57 180 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 KIAA1191Q96A73 305 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 PPP1R9BQ96SB3 815 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 ADAM2Q99965 735 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 MESP1Q9BRJ9 268 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 SERHL2Q9H4I8 314 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 ARFGAP3Q9NP61 516 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 ZNF212Q9UDV6 495 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 MID2Q9UJV3 735 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 TBC1D30Q9Y2I9 924 aa5.18□□□□□ -1.58
SMCHD1-213ENST00000609587 LOC102723971A0A1B0GUV8 181 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 F5H697 171 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 CDKL5O76039 1030 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 HARSP12081 509 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 ABCB4P21439 1286 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 NPTX2P47972 431 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 PXNP49023 591 aaPredicted RBP5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 NDUFV1P49821 464 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 ZNF134P52741 427 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 LOXL3P58215 753 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 GUCY1B3Q02153 619 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 KRT17Q04695 432 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 HLXQ14774 488 aaPredicted RBP5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 ARL13BQ3SXY8 428 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 MGAT5BQ3V5L5 792 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 PLA1AQ53H76 456 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 DGKKQ5KSL6 1271 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 TMEM108Q6UXF1 575 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 BEND5Q7L4P6 421 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 TMPRSS9Q7Z410 1059 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 COLGALT2Q8IYK4 626 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 ADGRG5Q8IZF4 528 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 TXLNBQ8N3L3 684 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 VPS37AQ8NEZ2 397 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 MORC4Q8TE76 937 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 SNX19Q92543 992 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 FUBP1Q96AE4 644 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 NACC2Q96BF6 587 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 ARPC5LQ9BPX5 153 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 SELENOOQ9BVL4 669 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 SYNPO2LQ9H987 977 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 TMEM74BQ9NUR3 256 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 TBC1D23Q9NUY8 699 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 MYO1AQ9UBC5 1043 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 CEP83Q9Y592 693 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 PCDHGB2Q9Y5G2 931 aa5.17□□□□□ -1.58
SMCHD1-213ENST00000609587 PIPSLA2A3N6 862 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 F5H423 210 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 RAB27BO00194 218 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 FOSP01100 380 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 ACVR2AP27037 513 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 IL1R2P27930 398 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 LRPAP1P30533 357 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 ZEB1P37275 1124 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 VAV2P52735 878 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 MAPK10P53779 464 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 BLOC1S1P78537 153 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 CHAF1AQ13111 956 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 STK3Q13188 491 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 SLC29A2Q14542 456 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 INSCQ1MX18 579 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 ABHD17BQ5VST6 288 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 MICALCLQ6ZW33 695 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 FAM9AQ8IZU1 332 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 PTDSS2Q9BVG9 487 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 WDR11Q9BZH6 1224 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 PRDM13Q9H4Q3 707 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 UNKLQ9H9P5 680 aaKnown RBP5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 XPNPEP3Q9NQH7 507 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 GJB4Q9NTQ9 266 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 TRMT13Q9NUP7 481 aaKnown RBP5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 ANKFY1Q9P2R3 1169 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 RGS17Q9UGC6 210 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 LRCH1Q9Y2L9 728 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 SPATA31A3Q5VYP0 1347 aa5.16□□□□□ -1.58
SMCHD1-213ENST00000609587 TRGV11A0A075B6L2 103 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms