RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 RCAN1P53805 252 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 KDSRQ06136 332 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 CCDC173Q0VFZ6 552 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 MYBPC2Q14324 1141 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 ZNF77Q15935 545 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 DDR2Q16832 855 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 GAB4Q2WGN9 574 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 EOGTQ5NDL2 527 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 SLC36A4Q6YBV0 504 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 GLRX5Q86SX6 157 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 FMNL3Q8IVF7 1028 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 TRIM22Q8IYM9 498 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 GALNT15Q8N3T1 639 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 NAT16Q8N8M0 369 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 LSM14AQ8ND56 463 aaKnown RBP10.04□□□□□ -0.8
CTCFL-220ENST00000608858 CCDC26Q8TAB7 109 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 MARVELD3Q96A59 401 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 IFT74Q96LB3 600 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 SENP8Q96LD8 212 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 PI4K2AQ9BTU6 479 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 PTPRHQ9HD43 1115 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 TM7SF3Q9NS93 570 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 CALCOCO1Q9P1Z2 691 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 MYO18AQ92614 2054 aaKnown RBP10.03□□□□□ -0.8
CTCFL-220ENST00000608858 MYOFQ9NZM1 2061 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 IGHV1OR15-9A0A0B4J2B8 117 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 ARHGEF35A5YM69 484 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 C2orf78A6NCI8 922 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 TULP1O00294 542 aaPredicted RBP10.03□□□□□ -0.8
CTCFL-220ENST00000608858 RRP8O43159 456 aaKnown RBP10.03□□□□□ -0.8
CTCFL-220ENST00000608858 NDUFS2O75306 463 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 KAT7O95251 611 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 USP17L7P0C7H9 530 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 HAPLN1P10915 354 aaPredicted RBP10.03□□□□□ -0.8
CTCFL-220ENST00000608858 GCFC2P16383 781 aaKnown RBP10.03□□□□□ -0.8
CTCFL-220ENST00000608858 EFNA5P52803 228 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 PEX3P56589 373 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 ZXDBP98169 803 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 FAM160A1Q05DH4 1040 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 STK3Q13188 491 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 CALCRLQ16602 461 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 RABEPKQ7Z6M1 372 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 C12orf40Q86WS4 652 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 ADGRG2Q8IZP9 1017 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 NAF1Q96HR8 494 aaKnown RBP10.03□□□□□ -0.8
CTCFL-220ENST00000608858 YTHDC1Q96MU7 727 aaKnown RBP10.03□□□□□ -0.8
CTCFL-220ENST00000608858 JAKMIP1Q96N16 626 aaKnown RBP10.03□□□□□ -0.8
CTCFL-220ENST00000608858 PNKPQ96T60 521 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 MFRPQ9BY79 579 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 OXCT2Q9BYC2 517 aaPredicted RBP10.03□□□□□ -0.8
CTCFL-220ENST00000608858 KIF9Q9HAQ2 790 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 TMLHEQ9NVH6 421 aa10.03□□□□□ -0.8
CTCFL-220ENST00000608858 FNDC3AQ9Y2H6 1198 aaKnown RBP10.03□□□□□ -0.8
CTCFL-220ENST00000608858 KNTC1P50748 2209 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 ATMQ13315 3056 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 B8ZZF3 427 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 SLC28A2O43868 658 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 CILPO75339 1184 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 PRPF40AO75400 957 aaKnown RBP10.02□□□□□ -0.81
CTCFL-220ENST00000608858 APODP05090 189 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 CXCL8P10145 99 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 MCF2P10911 925 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 JUPP14923 745 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 GNSP15586 552 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 HDCP19113 662 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 DDX6P26196 483 aaKnown RBP eCLIP10.02□□□□□ -0.81
CTCFL-220ENST00000608858 TNFSF9P41273 254 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 MATR3P43243 847 aaKnown RBP eCLIP10.02□□□□□ -0.81
CTCFL-220ENST00000608858 KIR2DL1P43626 348 aaPredicted RBP10.02□□□□□ -0.81
CTCFL-220ENST00000608858 PPP2R5AQ15172 486 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 HLA-BQ31612 363 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 COLEC12Q5KU26 742 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 TAS1R3Q7RTX0 852 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 ZNF419Q96HQ0 510 aaPredicted RBP10.02□□□□□ -0.81
CTCFL-220ENST00000608858 MRPL4Q9BYD3 311 aaKnown RBP10.02□□□□□ -0.81
CTCFL-220ENST00000608858 TRIM4Q9C037 500 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 ZCWPW1Q9H0M4 648 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 ARHGEF4Q9NR80 690 aa10.02□□□□□ -0.81
CTCFL-220ENST00000608858 DENND4CQ5VZ89 1909 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 CITO14578 2027 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 TRAV19A0A0A6YYK7 116 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 TEX51A0A1B0GUA7 166 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 TBC1D3BA6NDS4 549 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 SFI1A8K8P3 1242 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 LACTBL1A8MY62 500 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 WNT7AO00755 349 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 DEXIO95424 95 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 NFATC1O95644 943 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 CYP17A1P05093 508 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 LILRA4P59901 499 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 ATP2C1P98194 919 aaPredicted RBP10.01□□□□□ -0.81
CTCFL-220ENST00000608858 BNC1Q01954 994 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 SCRN1Q12765 414 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 ZNF268Q14587 947 aaPredicted RBP10.01□□□□□ -0.81
CTCFL-220ENST00000608858 DHCR24Q15392 516 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 SYCP2LQ5T4T6 812 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 GALNT17Q6IS24 598 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 RHBDF2Q6PJF5 856 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 MPZL3Q6UWV2 235 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 FILIP1Q7Z7B0 1213 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms