RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 IFT20Q8IY31 132 aa11.24□□□□□ -0.61
LINC01001-203ENST00000607448 CMASQ8NFW8 434 aaPredicted RBP11.24□□□□□ -0.61
LINC01001-203ENST00000607448 EDAQ92838 391 aa11.24□□□□□ -0.61
LINC01001-203ENST00000607448 CAVIN3Q969G5 261 aa11.24□□□□□ -0.61
LINC01001-203ENST00000607448 FAM84AQ96KN4 292 aa11.24□□□□□ -0.61
LINC01001-203ENST00000607448 MKNK1Q9BUB5 465 aa11.24□□□□□ -0.61
LINC01001-203ENST00000607448 RPF1Q9H9Y2 349 aaKnown RBP11.24□□□□□ -0.61
LINC01001-203ENST00000607448 PLEKHA5Q9HAU0 1116 aa11.24□□□□□ -0.61
LINC01001-203ENST00000607448 STIM2Q9P246 746 aa11.24□□□□□ -0.61
LINC01001-203ENST00000607448 INTUQ9ULD6 942 aa11.24□□□□□ -0.61
LINC01001-203ENST00000607448 NR2E1Q9Y466 385 aa11.24□□□□□ -0.61
LINC01001-203ENST00000607448 WDR27A2RRH5 827 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 ZMYND10O75800 440 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 PRPF6O94906 941 aaKnown RBP11.23□□□□□ -0.61
LINC01001-203ENST00000607448 SYF2O95926 243 aaKnown RBP11.23□□□□□ -0.61
LINC01001-203ENST00000607448 NR3C1P04150 777 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 APBA1Q02410 837 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 CREMQ03060 361 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 MEI1Q5TIA1 1274 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 SCARA3Q6AZY7 606 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 C8orf74Q6P047 294 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 GBP6Q6ZN66 633 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 CCDC149Q6ZUS6 474 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 TDRD5Q8NAT2 981 aaKnown RBP11.23□□□□□ -0.61
LINC01001-203ENST00000607448 ST13P5Q8NFI4 369 aaPredicted RBP11.23□□□□□ -0.61
LINC01001-203ENST00000607448 HDAC7Q8WUI4 952 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC01001-203ENST00000607448 SMG7Q92540 1137 aaKnown RBP11.23□□□□□ -0.61
LINC01001-203ENST00000607448 TAF4BQ92750 862 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 SAAL1Q96ER3 474 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 SPAG5Q96R06 1193 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 LRRC1Q9BTT6 524 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 PRKD2Q9BZL6 878 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 PLEKHA4Q9H4M7 779 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 WDR6Q9NNW5 1121 aaKnown RBP11.23□□□□□ -0.61
LINC01001-203ENST00000607448 SALL4Q9UJQ4 1053 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 AGO2Q9UKV8 859 aaKnown RBP11.23□□□□□ -0.61
LINC01001-203ENST00000607448 NUB1Q9Y5A7 615 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 TIMM13Q9Y5L4 95 aaPredicted RBP11.23□□□□□ -0.61
LINC01001-203ENST00000607448 CLUHO75153 1309 aa11.23□□□□□ -0.61
LINC01001-203ENST00000607448 COL4A3Q01955 1670 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 A0A0A6YYK5 440 aaPredicted RBP11.22□□□□□ -0.61
LINC01001-203ENST00000607448 GOLGA6BA6NDN3 693 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 A6NNZ2 444 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 GOLGA8KD6RF30 607 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 SPTLC1O15269 473 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 TRAPPC3O43617 180 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 TBC1D4O60343 1298 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 PALMO75781 387 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 C8AP07357 584 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 UCHL3P15374 230 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 FERP16591 822 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 SCP2P22307 547 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 LRPAP1P30533 357 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 RPL9P32969 192 aaKnown RBP11.22□□□□□ -0.61
LINC01001-203ENST00000607448 HOXD13P35453 343 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 NTHL1P78549 312 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 ROR1Q01973 937 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 RAB33AQ14088 237 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 MRPL58Q14197 206 aaKnown RBP11.22□□□□□ -0.61
LINC01001-203ENST00000607448 TUBB8Q3ZCM7 444 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 SLC8B1Q6J4K2 584 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 DPY19L2P1Q6NXN4 242 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 TRIM67Q6ZTA4 783 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 EFCAB13Q8IY85 973 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 EIF1ADQ8N9N8 165 aaKnown RBP11.22□□□□□ -0.61
LINC01001-203ENST00000607448 SLC7A14Q8TBB6 771 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 POMGNT1Q8WZA1 660 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 HVCN1Q96D96 273 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 ASIC4Q96FT7 647 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 PBKQ96KB5 322 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 SUSD3Q96L08 255 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 MYADMQ96S97 322 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 CBWD1Q9BRT8 395 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.22□□□□□ -0.61
LINC01001-203ENST00000607448 TSPYL1Q9H0U9 437 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 FAM204AQ9H8W3 233 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 HCFC1R1Q9NWW0 138 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 ZDHHC7Q9NXF8 308 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 LIMD1Q9UGP4 676 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 UBQLN1Q9UMX0 589 aaKnown RBP11.22□□□□□ -0.61
LINC01001-203ENST00000607448 BACE2Q9Y5Z0 518 aa11.22□□□□□ -0.61
LINC01001-203ENST00000607448 A0A087X0T9 212 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 GOLGA8IPA6NC78 632 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 GOLGA8JA6NMD2 632 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 CCL16O15467 120 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 BUB1O43683 1085 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 C1RP00736 705 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 PDGFBP01127 241 aaPredicted RBP11.21□□□□□ -0.61
LINC01001-203ENST00000607448 FAM228BP0C875 321 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 CYP3A5P20815 502 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 PON1P27169 355 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 GYS2P54840 703 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 ARPP19P56211 112 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 TNNC1P63316 161 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 ANKS3Q6ZW76 656 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 SND1Q7KZF4 910 aaKnown RBP eCLIP11.21□□□□□ -0.61
LINC01001-203ENST00000607448 IRF2BP2Q7Z5L9 587 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 GRASPQ7Z6J2 395 aaPredicted RBP11.21□□□□□ -0.61
LINC01001-203ENST00000607448 ZDHHC14Q8IZN3 488 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms