RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 FBXO27Q8NI29 283 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 SHKBP1Q8TBC3 707 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 SCG3Q8WXD2 468 aaKnown RBP6.77□□□□□ -1.32
RPF2-204ENST00000607388 P3H4Q92791 437 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 IWS1Q96ST2 819 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 PTPRHQ9HD43 1115 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 CISHQ9NSE2 258 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 WDR70Q9NW82 654 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 AKT3Q9Y243 479 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 DIS3Q9Y2L1 958 aaKnown RBP6.77□□□□□ -1.32
RPF2-204ENST00000607388 TMX2Q9Y320 296 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 NCANO14594 1321 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 DCTN3O75935 186 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 SORBS2O94875 1100 aaKnown RBP6.77□□□□□ -1.33
RPF2-204ENST00000607388 SLC4A1P02730 911 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 VIL1P09327 827 aaKnown RBP6.77□□□□□ -1.33
RPF2-204ENST00000607388 FGFR1P11362 822 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 LCP1P13796 627 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 PDGFRAP16234 1089 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 AMPD1P23109 780 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 GRIA1P42261 906 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 OGDHQ02218 1023 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 BNIP1Q12981 228 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 PGM5Q15124 567 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 MTFR1Q15390 333 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 HADHQ16836 314 aaKnown RBP6.77□□□□□ -1.33
RPF2-204ENST00000607388 CGB2Q6NT52 195 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 DENND1BQ6P3S1 775 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 LAYNQ6UX15 382 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 SPOCD1Q6ZMY3 1216 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 SCUBE3Q8IX30 993 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 PNPLA1Q8N8W4 532 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 SMC1BQ8NDV3 1235 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 WDR60Q8WVS4 1066 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 PRPF31Q8WWY3 499 aaKnown RBP6.77□□□□□ -1.33
RPF2-204ENST00000607388 NMD3Q96D46 503 aaKnown RBP6.77□□□□□ -1.33
RPF2-204ENST00000607388 CPB2Q96IY4 423 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 PHF12Q96QT6 1004 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 NMUR2Q9GZQ4 415 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 PARVAQ9NVD7 372 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 PSMC3IPQ9P2W1 217 aaPredicted RBP6.77□□□□□ -1.33
RPF2-204ENST00000607388 ROBO3Q96MS0 1386 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 PIK3CDO00329 1044 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 AIM2O14862 343 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 PGM3O95394 542 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 CXCL8P10145 99 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 GZMAP12544 262 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 RANBP1P43487 201 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 GSCP56915 257 aaPredicted RBP6.77□□□□□ -1.33
RPF2-204ENST00000607388 KLC1Q07866 573 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 GRM1Q13255 1194 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 LY6KQ17RY6 165 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 ZC3H12AQ5D1E8 599 aaKnown RBP6.77□□□□□ -1.33
RPF2-204ENST00000607388 SLC39A4Q6P5W5 647 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 DENND5BQ6ZUT9 1274 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 CROCCP2Q86T23 111 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 TRABD2AQ86V40 505 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 TMEM192Q8IY95 271 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 SPATA6LQ8N4H0 392 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 PAF1Q8N7H5 531 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 GBP7Q8N8V2 638 aaPredicted RBP6.77□□□□□ -1.33
RPF2-204ENST00000607388 ASAP3Q8TDY4 903 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 USP33Q8TEY7 942 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 DEPDC1BQ8WUY9 529 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 MAIP1Q8WWC4 291 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 COPS5Q92905 334 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 EXT2Q93063 718 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 EMID1Q96A84 441 aaPredicted RBP6.77□□□□□ -1.33
RPF2-204ENST00000607388 DDX27Q96GQ7 796 aaKnown RBP6.77□□□□□ -1.33
RPF2-204ENST00000607388 B3GNT5Q9BYG0 378 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 ZC3H7BQ9UGR2 993 aaKnown RBP6.77□□□□□ -1.33
RPF2-204ENST00000607388 SCOCQ9UIL1 159 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 PPME1Q9Y570 386 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 GON4LQ3T8J9 2241 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 ZNF536O15090 1300 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 ZNF541Q9H0D2 1346 aa6.77□□□□□ -1.33
RPF2-204ENST00000607388 MYOCOSA0A1B0GUC4 107 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 GOLGA8CPA6NN73 597 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 FCHO1O14526 889 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 FSCN2O14926 492 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 MAP3K13O43283 966 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 PRPSAP2O60256 369 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 DNAJC6O75061 913 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 ITGB3P05106 788 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 RPL22P35268 128 aaKnown RBP6.76□□□□□ -1.33
RPF2-204ENST00000607388 NME3Q13232 169 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 PLCB4Q15147 1175 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 RASA2Q15283 850 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 PLEKHG4Q58EX7 1191 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 IYDQ6PHW0 289 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 IZUMO2Q6UXV1 221 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 DNAAF3Q8N9W5 541 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 PPP4R1Q8TF05 950 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.76□□□□□ -1.33
RPF2-204ENST00000607388 TFAP2BQ92481 460 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 GMCL1Q96IK5 515 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 CLMNQ96JQ2 1002 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 GPBP1L1Q9HC44 474 aaPredicted RBP6.76□□□□□ -1.33
RPF2-204ENST00000607388 ZNF302Q9NR11 478 aa6.76□□□□□ -1.33
RPF2-204ENST00000607388 CYP26B1Q9NR63 512 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms