RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 CTHP32929 405 aa14.28□□□□□ -0.12
CTSA-213ENST00000606782 PRCPP42785 496 aa14.28□□□□□ -0.12
CTSA-213ENST00000606782 GPR15P49685 360 aa14.28□□□□□ -0.12
CTSA-213ENST00000606782 CDR1P51861 262 aa14.28□□□□□ -0.12
CTSA-213ENST00000606782 ZNF268Q14587 947 aaPredicted RBP14.28□□□□□ -0.12
CTSA-213ENST00000606782 DDR2Q16832 855 aa14.28□□□□□ -0.12
CTSA-213ENST00000606782 KNOP1Q1ED39 458 aaKnown RBP14.28□□□□□ -0.12
CTSA-213ENST00000606782 HS2ST1Q7LGA3 356 aa14.28□□□□□ -0.12
CTSA-213ENST00000606782 GPIHBP1Q8IV16 184 aa14.28□□□□□ -0.12
CTSA-213ENST00000606782 GUF1Q8N442 669 aaKnown RBP14.28□□□□□ -0.12
CTSA-213ENST00000606782 NOC3LQ8WTT2 800 aaKnown RBP14.28□□□□□ -0.12
CTSA-213ENST00000606782 SYAP1Q96A49 352 aaPredicted RBP14.28□□□□□ -0.12
CTSA-213ENST00000606782 CGRRF1Q99675 332 aa14.28□□□□□ -0.12
CTSA-213ENST00000606782 KIF9Q9HAQ2 790 aa14.28□□□□□ -0.12
CTSA-213ENST00000606782 UXTQ9UBK9 157 aaPredicted RBP14.28□□□□□ -0.12
CTSA-213ENST00000606782 CDH9Q9ULB4 789 aa14.28□□□□□ -0.12
CTSA-213ENST00000606782 R3HCC1Q9Y3T6 440 aaKnown RBP14.28□□□□□ -0.12
CTSA-213ENST00000606782 SLC38A8A6NNN8 435 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 SPECC1L-ADORA2AF8WAN1 911 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 BIN1O00499 593 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 HCRTO43612 131 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 TACC1O75410 805 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 LETM1O95202 739 aaPredicted RBP14.27□□□□□ -0.13
CTSA-213ENST00000606782 KIF20AO95235 890 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 PAPSS2O95340 614 aaPredicted RBP14.27□□□□□ -0.13
CTSA-213ENST00000606782 LMO2P25791 158 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 GAS6Q14393 721 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 MAPRE1Q15691 268 aaKnown RBP14.27□□□□□ -0.13
CTSA-213ENST00000606782 WDR44Q5JSH3 913 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 DGKKQ5KSL6 1271 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 TXNDC11Q6PKC3 985 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 VSTM1Q6UX27 236 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 C4orf50Q6ZRC1 276 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 SPATA2LQ8IUW3 424 aaPredicted RBP14.27□□□□□ -0.13
CTSA-213ENST00000606782 SMYD4Q8IYR2 804 aaPredicted RBP14.27□□□□□ -0.13
CTSA-213ENST00000606782 SPEM1Q8N4L4 309 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 RDH13Q8NBN7 331 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 GOLGA5Q8TBA6 731 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 ATRIPQ8WXE1 791 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 ZNF516Q92618 1163 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 RUBCNQ92622 972 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 USP13Q92995 863 aaPredicted RBP14.27□□□□□ -0.13
CTSA-213ENST00000606782 ZFYVE19Q96K21 471 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 SPATA17Q96L03 361 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 FNBP1Q96RU3 617 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 SYT15Q9BQS2 421 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 KCTD10Q9H3F6 313 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 CRTAC1Q9NQ79 661 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 TDP1Q9NUW8 608 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 THG1LQ9NWX6 298 aaKnown RBP14.27□□□□□ -0.13
CTSA-213ENST00000606782 GTSE1Q9NYZ3 720 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 MAPK8IP1Q9UQF2 711 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 OBSL1O75147 1896 aa14.27□□□□□ -0.13
CTSA-213ENST00000606782 PDXKO00764 312 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 CLIC2O15247 247 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 ATP2C2O75185 946 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 TADA3O75528 432 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 DLATP10515 647 aaKnown RBP14.26□□□□□ -0.13
CTSA-213ENST00000606782 CD44P16070 742 aaKnown RBP14.26□□□□□ -0.13
CTSA-213ENST00000606782 TNNI1P19237 187 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 AVPR1AP37288 418 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 PPP1R2P41236 205 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 SOX9P48436 509 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 CCR3P51677 355 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 KPNA1P52294 538 aaPredicted RBP14.26□□□□□ -0.13
CTSA-213ENST00000606782 NRLP54845 237 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 CLDN10P78369 228 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 LRRC32Q14392 662 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 CCDC142Q17RM4 750 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 ITPRIPL2Q3MIP1 535 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 SDHAF4Q5VUM1 108 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 TXNDC8Q6A555 127 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 SLC9A9Q8IVB4 645 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 NELFCDQ8IXH7 590 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 SYNPOQ8N3V7 929 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 MAB21L3Q8N8X9 362 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 MRPS31Q92665 395 aaKnown RBP14.26□□□□□ -0.13
CTSA-213ENST00000606782 DHTKD1Q96HY7 919 aaPredicted RBP14.26□□□□□ -0.13
CTSA-213ENST00000606782 SMG9Q9H0W8 520 aaKnown RBP14.26□□□□□ -0.13
CTSA-213ENST00000606782 XYLT2Q9H1B5 865 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 EPC1Q9H2F5 836 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 VRTNQ9H8Y1 702 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 GKN1Q9NS71 199 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 DMAC2Q9NW81 257 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 MAGEC2Q9UBF1 373 aaPredicted RBP14.26□□□□□ -0.13
CTSA-213ENST00000606782 CCL26Q9Y258 94 aa14.26□□□□□ -0.13
CTSA-213ENST00000606782 GREB1Q4ZG55 1949 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 TULP1O00294 542 aaPredicted RBP14.25□□□□□ -0.13
CTSA-213ENST00000606782 HOXA6P31267 233 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 ATICP31939 592 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 CYP2J2P51589 502 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 TNK2Q07912 1038 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 CCINQ13939 588 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 PPP2R5DQ14738 602 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 TSSK4Q6SA08 328 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 MLKLQ8NB16 471 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 MYCBPAPQ8TBZ2 947 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 CCDC127Q96BQ5 260 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 HPS4Q9NQG7 708 aa14.25□□□□□ -0.13
CTSA-213ENST00000606782 GCNT4Q9P109 453 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms