RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 NCANO14594 1321 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ITIH6Q6UXX5 1313 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ZNF638Q14966 1978 aaKnown RBP10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 MYO16Q9Y6X6 1858 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 GRXCR2A6NFK2 248 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 F8VZ95 297 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 H3BQ06 376 aaPredicted RBP10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 O00370 1275 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ATP2C2O75185 946 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 RFPL2O75678 378 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 NOL4O94818 638 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 RTN3O95197 1032 aaPredicted RBP10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SPATA31D3P0C874 917 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 NPR3P17342 541 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PFKLP17858 780 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ATF6P18850 670 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CDC25CP30307 473 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 UBASH3AP57075 661 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 RBM10P98175 930 aaKnown RBP10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PTK2Q05397 1052 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 TRIM14Q14142 442 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 NR1I3Q14994 352 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CNGA2Q16280 664 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PABPC1LQ4VXU2 614 aaKnown RBP10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 LCLAT1Q6UWP7 414 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 TMC5Q6UXY8 1006 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SPATA31D4Q6ZUB0 917 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 RRAGAQ7L523 313 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ZNF677Q86XU0 584 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 FAM71AQ8IYT1 594 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ANKRD52Q8NB46 1076 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PDZD8Q8NEN9 1154 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SLC2A14Q8TDB8 520 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 HEXIM2Q96MH2 286 aaKnown RBP10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ASB2Q96Q27 587 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 GCNAQ96QF7 691 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SPAG5Q96R06 1193 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 MED10Q9BTT4 135 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 TTLL2Q9BWV7 592 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PHF7Q9BWX1 381 aaPredicted RBP10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 B3GNT5Q9BYG0 378 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 GPR88Q9GZN0 384 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 NUCKS1Q9H1E3 243 aaKnown RBP10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CRISPLD1Q9H336 500 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 KRT82Q9NSB4 513 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 FAM207AQ9NSI2 230 aaPredicted RBP10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 NR2E1Q9Y466 385 aa10.05□□□□□ -0.8
SQSTM1P1-201ENST00000603451 A0A1W2PQJ5 194 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 FAM92AA1XBS5 289 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 HCRTO43612 131 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 AP1G2O75843 785 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 BDNFP23560 247 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CYP2F1P24903 491 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 DDX6P26196 483 aaKnown RBP eCLIP10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 GNA15P30679 374 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PBX1P40424 430 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PDE6CP51160 858 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 JAM2P57087 298 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 BST2Q10589 180 aaKnown RBP10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 RAPGEF1Q13905 1077 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 TAF12Q16514 161 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CYP4A22Q5TCH4 519 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 DENND5BQ6ZUT9 1274 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PAQR9Q6ZVX9 377 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PDZD4Q76G19 769 aaPredicted RBP10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 OTOP3Q7RTS5 596 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SCML4Q8N228 414 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 TTC9BQ8N6N2 239 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 STK32AQ8WU08 396 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 KAT5Q92993 513 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ACSF2Q96CM8 615 aaPredicted RBP10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PCMTD1Q96MG8 357 aaPredicted RBP10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 DUSP16Q9BY84 665 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ZNF518BQ9C0D4 1074 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 FBXO44Q9H4M3 255 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CYLDQ9NQC7 956 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 FAM49BQ9NUQ9 324 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 GDE1Q9NZC3 331 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 TSPAN16Q9UKR8 245 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PCDHGC3Q9UN70 934 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 FHOD1Q9Y613 1164 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 NOTCH4Q99466 2003 aa10.04□□□□□ -0.8
SQSTM1P1-201ENST00000603451 DOCK8Q8NF50 2099 aa10.03□□□□□ -0.8
SQSTM1P1-201ENST00000603451 F8VP50 259 aa10.03□□□□□ -0.8
SQSTM1P1-201ENST00000603451 XPO1O14980 1071 aaKnown RBP10.03□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CCL16O15467 120 aa10.03□□□□□ -0.8
SQSTM1P1-201ENST00000603451 LSM8O95777 96 aaKnown RBP10.03□□□□□ -0.8
SQSTM1P1-201ENST00000603451 RHOP08100 348 aa10.03□□□□□ -0.8
SQSTM1P1-201ENST00000603451 KRT5P13647 590 aa10.03□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CCDC130P13994 396 aa10.03□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CD19P15391 556 aa10.03□□□□□ -0.8
SQSTM1P1-201ENST00000603451 WEE1P30291 646 aa10.03□□□□□ -0.8
SQSTM1P1-201ENST00000603451 GRIK1P39086 918 aa10.03□□□□□ -0.8
SQSTM1P1-201ENST00000603451 STAT1P42224 750 aa10.03□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PLA2G4AP47712 749 aa10.03□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SNX16P57768 344 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms