RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 LMO2P25791 158 aa22.69■■□□□ 1.22
PPFIA3-209ENST00000602783 CYP2J2P51589 502 aa22.69■■□□□ 1.22
PPFIA3-209ENST00000602783 SRSF5Q13243 272 aaKnown RBP22.69■■□□□ 1.22
PPFIA3-209ENST00000602783 ZNF268Q14587 947 aaPredicted RBP22.69■■□□□ 1.22
PPFIA3-209ENST00000602783 BMT2Q1RMZ1 405 aa22.69■■□□□ 1.22
PPFIA3-209ENST00000602783 LIMS2Q7Z4I7 341 aa22.69■■□□□ 1.22
PPFIA3-209ENST00000602783 RIN3Q8TB24 985 aa22.69■■□□□ 1.22
PPFIA3-209ENST00000602783 KBTBD7Q8WVZ9 684 aa22.69■■□□□ 1.22
PPFIA3-209ENST00000602783 FUBP3Q96I24 572 aaKnown RBP eCLIP22.69■■□□□ 1.22
PPFIA3-209ENST00000602783 SPATA32Q96LK8 384 aa22.69■■□□□ 1.22
PPFIA3-209ENST00000602783 CYP2S1Q96SQ9 504 aa22.69■■□□□ 1.22
PPFIA3-209ENST00000602783 SYT15Q9BQS2 421 aa22.69■■□□□ 1.22
PPFIA3-209ENST00000602783 PARD6AQ9NPB6 346 aa22.69■■□□□ 1.22
PPFIA3-209ENST00000602783 DNAH14Q0VDD8 3507 aa22.69■■□□□ 1.22
PPFIA3-209ENST00000602783 PDGFRBP09619 1106 aa22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 SLFN14P0C7P3 912 aa22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 ARSAP15289 507 aa22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 HOXC13P31276 330 aa22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 CNR2P34972 360 aa22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 PSMC1P62191 440 aaKnown RBP22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 KRT85P78386 507 aa22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 SPEM2Q0P670 501 aa22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 GRSF1Q12849 480 aaKnown RBP eCLIP22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 SNRNP35Q16560 246 aaKnown RBP22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 C4orf50Q6ZRC1 276 aa22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 HS2ST1Q7LGA3 356 aa22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 WDR49Q8IV35 697 aa22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 TTC16Q8NEE8 873 aa22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 MMS19Q96T76 1030 aa22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 MAGEC2Q9UBF1 373 aaPredicted RBP22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 CDH9Q9ULB4 789 aa22.68■■□□□ 1.22
PPFIA3-209ENST00000602783 A0A1B0GVL5 298 aa22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 PRR5-ARHGAP8B1AHC4 643 aa22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 TRDMT1O14717 391 aaKnown RBP22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 RETP07949 1114 aa22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 DLATP10515 647 aaKnown RBP22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 SDHBP21912 280 aa22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 MAGEA11P43364 429 aa22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 ARHGAP8P85298 464 aa22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 LMNB2Q03252 620 aa22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 FAM160A1Q05DH4 1040 aa22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 TMEM196Q5HYL7 178 aa22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 FSTL4Q6MZW2 842 aa22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 TRAPPC11Q7Z392 1133 aa22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 PAGE5Q96GU1 130 aa22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 SLC22A12Q96S37 553 aa22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 CRTAC1Q9NQ79 661 aa22.67■■□□□ 1.22
PPFIA3-209ENST00000602783 ATG2BQ96BY7 2078 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 TRAV19A0A0A6YYK7 116 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 KLRC4O43908 158 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 CST3P01034 146 aaPredicted RBP22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 CKMP06732 381 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 USP17L7P0C7H9 530 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 TNNI1P19237 187 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 WARSP23381 471 aaKnown RBP22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 BDNFP23560 247 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 SNRPFP62306 86 aaKnown RBP22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 AMPD2Q01433 879 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 PDGFRLQ15198 375 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 PKN3Q6P5Z2 889 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 FSIP1Q8NA03 581 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 XXYLT1Q8NBI6 393 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 MYLPFQ96A32 169 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 CHFRQ96EP1 664 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 FNBP1Q96RU3 617 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 EXOC1Q9NV70 894 aa22.66■■□□□ 1.22
PPFIA3-209ENST00000602783 CMA1P23946 247 aa22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 HOXA6P31267 233 aa22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 GRIK1P39086 918 aa22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 GALK1P51570 392 aa22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 ATXN1P54253 815 aaKnown RBP22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 CYP27A1Q02318 531 aa22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 CYP24A1Q07973 514 aa22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 MTF1Q14872 753 aa22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 MAPRE1Q15691 268 aaKnown RBP22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 VSTM1Q6UX27 236 aa22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 CEP68Q76N32 757 aa22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 ARL14EPQ8N8R7 260 aaPredicted RBP22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 CCDC127Q96BQ5 260 aa22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 CGRRF1Q99675 332 aa22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 FBRSL1Q9HCM7 1045 aaKnown RBP22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 DUS2Q9NX74 493 aaKnown RBP22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 CDV3Q9UKY7 258 aaKnown RBP22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 HPSEQ9Y251 543 aa22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 PTPRDP23468 1912 aa22.65■■□□□ 1.22
PPFIA3-209ENST00000602783 SDK1Q7Z5N4 2213 aa22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 C2orf78A6NCI8 922 aa22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 PSMD6Q15008 389 aa22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 ZNF77Q15935 545 aa22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 KNOP1Q1ED39 458 aaKnown RBP22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 WDR5BQ86VZ2 330 aa22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 C12orf56Q8IXR9 622 aa22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 KIAA0895Q8NCT3 520 aa22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 SPATA17Q96L03 361 aa22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 MRPL45Q9BRJ2 306 aaKnown RBP22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 SNX25Q9H3E2 840 aa22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 ECT2Q9H8V3 914 aa22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 GCNT4Q9P109 453 aa22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 CGNQ9P2M7 1197 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms