RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 MARCH5Q9NX47 278 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 IP6K2Q9UHH9 426 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 TMEM191CA6NGB0 347 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 MIF4GDA9UHW6 222 aaKnown RBP18.98■□□□□ 0.63
VRK3-225ENST00000601912 E5RJQ4 531 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 GOLGA8SH3BPF8 625 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 XPO1O14980 1071 aaKnown RBP18.98■□□□□ 0.63
VRK3-225ENST00000601912 SPOPO43791 374 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 SLU7O95391 586 aaKnown RBP18.98■□□□□ 0.63
VRK3-225ENST00000601912 COMTP21964 271 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 PLA2G4AP47712 749 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 DNA2P51530 1060 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 PTPROQ16827 1216 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 OR6B2Q6IFH4 312 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 ZDHHC17Q8IUH5 632 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 C7orf61Q8IZ16 206 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 MNS1Q8NEH6 495 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.98■□□□□ 0.63
VRK3-225ENST00000601912 BADQ92934 168 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 ZNF689Q96CS4 500 aaPredicted RBP18.98■□□□□ 0.63
VRK3-225ENST00000601912 MCRS1Q96EZ8 462 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 HES6Q96HZ4 224 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 MCEEQ96PE7 176 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 HCSTQ9UBK5 93 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 TJP2Q9UDY2 1190 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 CARNS1A5YM72 827 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 TULP2O00295 520 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 CLDN5O00501 218 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 SRGAP2O75044 1071 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 PPP1R15BQ5SWA1 713 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 SPOUT1Q5T280 376 aaKnown RBP18.97■□□□□ 0.63
VRK3-225ENST00000601912 FAM117BQ6P1L5 589 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 FUT10Q6P4F1 479 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 PAQR9Q6ZVX9 377 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 CEP57Q86XR8 500 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 UBL4BQ8N7F7 174 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 CEP112Q8N8E3 955 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 SMARCD1Q96GM5 515 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 PSMB7Q99436 277 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 HTATIP2Q9BUP3 242 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 GPR62Q9BZJ7 368 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 KRT82Q9NSB4 513 aa18.97■□□□□ 0.63
VRK3-225ENST00000601912 TSC2P49815 1807 aa18.96■□□□□ 0.63
VRK3-225ENST00000601912 ZBBXA8MT70 800 aa18.96■□□□□ 0.63
VRK3-225ENST00000601912 NT5C1B-RDH14C9J2C7 533 aa18.96■□□□□ 0.63
VRK3-225ENST00000601912 KCNK3O14649 394 aa18.96■□□□□ 0.63
VRK3-225ENST00000601912 PROSCO94903 275 aa18.96■□□□□ 0.63
VRK3-225ENST00000601912 RPL7AP62424 266 aaKnown RBP18.96■□□□□ 0.63
VRK3-225ENST00000601912 CKAP4Q07065 602 aaKnown RBP18.96■□□□□ 0.63
VRK3-225ENST00000601912 BTG3Q14201 252 aaPredicted RBP18.96■□□□□ 0.63
VRK3-225ENST00000601912 CCDC142Q17RM4 750 aa18.96■□□□□ 0.63
VRK3-225ENST00000601912 VARS2Q5ST30 1063 aaKnown RBP18.96■□□□□ 0.63
VRK3-225ENST00000601912 FAM35AQ86V20 835 aa18.96■□□□□ 0.63
VRK3-225ENST00000601912 CMTR2Q8IYT2 770 aaKnown RBP18.96■□□□□ 0.63
VRK3-225ENST00000601912 DCP1BQ8IZD4 617 aaKnown RBP18.96■□□□□ 0.63
VRK3-225ENST00000601912 MYRIPQ8NFW9 859 aa18.96■□□□□ 0.63
VRK3-225ENST00000601912 OR10T2Q8NGX3 314 aa18.96■□□□□ 0.63
VRK3-225ENST00000601912 MYLPFQ96A32 169 aa18.96■□□□□ 0.63
VRK3-225ENST00000601912 PBKQ96KB5 322 aa18.96■□□□□ 0.63
VRK3-225ENST00000601912 CARD6Q9BX69 1037 aa18.96■□□□□ 0.63
VRK3-225ENST00000601912 TRIM7Q9C029 511 aa18.96■□□□□ 0.63
VRK3-225ENST00000601912 CWH43Q9H720 699 aa18.96■□□□□ 0.63
VRK3-225ENST00000601912 CES2O00748 559 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 AP1G2O75843 785 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 GJB6O95452 261 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 FGFR3P22607 806 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 CXCR5P32302 372 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 PBX3P40426 434 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 RPL34P49207 117 aaKnown RBP18.95■□□□□ 0.62
VRK3-225ENST00000601912 TERF1P54274 439 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 PIGHQ14442 188 aaPredicted RBP18.95■□□□□ 0.62
VRK3-225ENST00000601912 FAM102AQ5T9C2 384 aaPredicted RBP18.95■□□□□ 0.62
VRK3-225ENST00000601912 C4orf50Q6ZRC1 276 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 CLEC20AQ6ZU45 233 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 FAM183BPQ6ZVS7 135 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 ZNF365Q70YC5 407 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 PIGZQ86VD9 579 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 CAPZA3Q96KX2 299 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 YME1L1Q96TA2 773 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 METTL5Q9NRN9 209 aaKnown RBP18.95■□□□□ 0.62
VRK3-225ENST00000601912 RNF14Q9UBS8 474 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 MKI67P46013 3256 aaKnown RBP18.95■□□□□ 0.62
VRK3-225ENST00000601912 PIK3R2O00459 728 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 ZNF185O15231 689 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 MAN1A1P33908 653 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 MAP3K7CLP57077 242 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 CTXN3Q4LDR2 81 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 CCDC181Q5TID7 509 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 ZNF280DQ6N043 979 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 PSRC1Q6PGN9 363 aaPredicted RBP18.95■□□□□ 0.62
VRK3-225ENST00000601912 C16orf59Q7L2K0 433 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 TMCO2Q7Z6W1 182 aaPredicted RBP18.95■□□□□ 0.62
VRK3-225ENST00000601912 FNIP1Q8TF40 1166 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 COG1Q8WTW3 980 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 KCTD13Q8WZ19 329 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 PKMYT1Q99640 499 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 LRRC4Q9HBW1 653 aa18.95■□□□□ 0.62
VRK3-225ENST00000601912 CCDC66A2RUB6 948 aa18.94■□□□□ 0.62
VRK3-225ENST00000601912 OR6C75A6NL08 312 aa18.94■□□□□ 0.62
VRK3-225ENST00000601912 H7C4K7 107 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms