RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 HUS1O60921 280 aa18■□□□□ 0.47
USE1-208ENST00000600970 TBCAO75347 108 aaKnown RBP18■□□□□ 0.47
USE1-208ENST00000600970 PLCG1P19174 1290 aa18■□□□□ 0.47
USE1-208ENST00000600970 ADSSP30520 456 aa18■□□□□ 0.47
USE1-208ENST00000600970 UBA7P41226 1012 aa18■□□□□ 0.47
USE1-208ENST00000600970 DHPSP49366 369 aaPredicted RBP18■□□□□ 0.47
USE1-208ENST00000600970 MYL7Q01449 175 aa18■□□□□ 0.47
USE1-208ENST00000600970 UAP1L1Q3KQV9 507 aa18■□□□□ 0.47
USE1-208ENST00000600970 SCARA3Q6AZY7 606 aa18■□□□□ 0.47
USE1-208ENST00000600970 OSTM1Q86WC4 334 aa18■□□□□ 0.47
USE1-208ENST00000600970 CCDC33Q8N5R6 958 aa18■□□□□ 0.47
USE1-208ENST00000600970 FSIP1Q8NA03 581 aa18■□□□□ 0.47
USE1-208ENST00000600970 DEFB124Q8NES8 71 aa18■□□□□ 0.47
USE1-208ENST00000600970 MDGA1Q8NFP4 955 aa18■□□□□ 0.47
USE1-208ENST00000600970 POMGNT1Q8WZA1 660 aa18■□□□□ 0.47
USE1-208ENST00000600970 PIGKQ92643 395 aa18■□□□□ 0.47
USE1-208ENST00000600970 SRRM3A6NNA2 597 aaPredicted RBP17.99■□□□□ 0.47
USE1-208ENST00000600970 HCRTO43612 131 aa17.99■□□□□ 0.47
USE1-208ENST00000600970 NFATC1O95644 943 aa17.99■□□□□ 0.47
USE1-208ENST00000600970 ITGB3P05106 788 aa17.99■□□□□ 0.47
USE1-208ENST00000600970 HDCP19113 662 aa17.99■□□□□ 0.47
USE1-208ENST00000600970 ZXDBP98169 803 aa17.99■□□□□ 0.47
USE1-208ENST00000600970 TFAMQ00059 246 aaKnown RBP17.99■□□□□ 0.47
USE1-208ENST00000600970 KCNB1Q14721 858 aa17.99■□□□□ 0.47
USE1-208ENST00000600970 CRY1Q16526 586 aa17.99■□□□□ 0.47
USE1-208ENST00000600970 GAB4Q2WGN9 574 aa17.99■□□□□ 0.47
USE1-208ENST00000600970 CFAP221Q4G0U5 840 aa17.99■□□□□ 0.47
USE1-208ENST00000600970 TMEM92Q6UXU6 159 aa17.99■□□□□ 0.47
USE1-208ENST00000600970 SPATA2LQ8IUW3 424 aaPredicted RBP17.99■□□□□ 0.47
USE1-208ENST00000600970 TMEM86AQ8N2M4 240 aa17.99■□□□□ 0.47
USE1-208ENST00000600970 C1orf127Q8N9H9 656 aa17.99■□□□□ 0.47
USE1-208ENST00000600970 OLIG1Q8TAK6 271 aa17.99■□□□□ 0.47
USE1-208ENST00000600970 EVLQ9UI08 416 aaPredicted RBP17.99■□□□□ 0.47
USE1-208ENST00000600970 ARHGAP26Q9UNA1 814 aa17.99■□□□□ 0.47
USE1-208ENST00000600970 HNRNPLP14866 589 aaKnown RBP eCLIP17.98■□□□□ 0.47
USE1-208ENST00000600970 POSTNQ15063 836 aa17.98■□□□□ 0.47
USE1-208ENST00000600970 ZNF720Q7Z2F6 126 aa17.98■□□□□ 0.47
USE1-208ENST00000600970 TTC30AQ86WT1 665 aa17.98■□□□□ 0.47
USE1-208ENST00000600970 SCN4BQ8IWT1 228 aa17.98■□□□□ 0.47
USE1-208ENST00000600970 ZSWIM2Q8NEG5 633 aa17.98■□□□□ 0.47
USE1-208ENST00000600970 CXorf38Q8TB03 319 aa17.98■□□□□ 0.47
USE1-208ENST00000600970 FUBP3Q96I24 572 aaKnown RBP eCLIP17.98■□□□□ 0.47
USE1-208ENST00000600970 KIF2CQ99661 725 aa17.98■□□□□ 0.47
USE1-208ENST00000600970 FAM213AQ9BRX8 229 aa17.98■□□□□ 0.47
USE1-208ENST00000600970 GDAP2Q9NXN4 497 aa17.98■□□□□ 0.47
USE1-208ENST00000600970 KIF3AQ9Y496 699 aa17.98■□□□□ 0.47
USE1-208ENST00000600970 ZZEF1O43149 2961 aa17.97■□□□□ 0.47
USE1-208ENST00000600970 TULP1O00294 542 aaPredicted RBP17.97■□□□□ 0.47
USE1-208ENST00000600970 GABRDO14764 452 aa17.97■□□□□ 0.47
USE1-208ENST00000600970 PPP1R37O75864 691 aa17.97■□□□□ 0.47
USE1-208ENST00000600970 MRPS21P82921 87 aaKnown RBP17.97■□□□□ 0.47
USE1-208ENST00000600970 GRIN1Q05586 938 aa17.97■□□□□ 0.47
USE1-208ENST00000600970 LMAN2Q12907 356 aa17.97■□□□□ 0.47
USE1-208ENST00000600970 TRIM61Q5EBN2 209 aa17.97■□□□□ 0.47
USE1-208ENST00000600970 KIAA1211LQ6NV74 962 aa17.97■□□□□ 0.47
USE1-208ENST00000600970 SFR1Q86XK3 245 aa17.97■□□□□ 0.47
USE1-208ENST00000600970 BRSK2Q8IWQ3 736 aa17.97■□□□□ 0.47
USE1-208ENST00000600970 LRRC52Q8N7C0 313 aa17.97■□□□□ 0.47
USE1-208ENST00000600970 SPATA18Q8TC71 538 aa17.97■□□□□ 0.47
USE1-208ENST00000600970 RLN3Q8WXF3 142 aa17.97■□□□□ 0.47
USE1-208ENST00000600970 LARP4BQ92615 738 aaKnown RBP17.97■□□□□ 0.47
USE1-208ENST00000600970 HVCN1Q96D96 273 aa17.97■□□□□ 0.47
USE1-208ENST00000600970 NUSAP1Q9BXS6 441 aaKnown RBP17.97■□□□□ 0.47
USE1-208ENST00000600970 SNX9Q9Y5X1 595 aa17.97■□□□□ 0.47
USE1-208ENST00000600970 PLXND1Q9Y4D7 1925 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 LEFTY2O00292 366 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 ALDH1A2O94788 518 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 PCSK1P29120 753 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 P2RY2P41231 377 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 MAGEA11P43364 429 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 LHX1P48742 406 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 PDE6CP51160 858 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 KCNA1Q09470 495 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 FAM171BQ6P995 826 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 SFTPA1Q8IWL2 248 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 ADGRF2Q8IZF7 708 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 CSGALNACT2Q8N6G5 542 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 TOP6BLQ8N6T0 577 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 FRMD1Q8N878 549 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 KRI1Q8N9T8 703 aaKnown RBP17.96■□□□□ 0.47
USE1-208ENST00000600970 RASSF8Q8NHQ8 419 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 CACTINQ8WUQ7 758 aaKnown RBP17.96■□□□□ 0.47
USE1-208ENST00000600970 ZCCHC14Q8WYQ9 949 aaKnown RBP17.96■□□□□ 0.47
USE1-208ENST00000600970 FAM84AQ96KN4 292 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 FNBP1Q96RU3 617 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 STRA6Q9BX79 667 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 TMEM74BQ9NUR3 256 aa17.96■□□□□ 0.47
USE1-208ENST00000600970 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 TNFRSF10BO14763 440 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 HYAL3O43820 417 aaPredicted RBP17.95■□□□□ 0.46
USE1-208ENST00000600970 ATP2C2O75185 946 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 CYP17A1P05093 508 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 CHRM1P11229 460 aaPredicted RBP17.95■□□□□ 0.46
USE1-208ENST00000600970 ENGP17813 658 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 DDIT3P35638 169 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 LONP1P36776 959 aaKnown RBP17.95■□□□□ 0.46
USE1-208ENST00000600970 MAPK8P45983 427 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 SLC6A11P48066 632 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 MESP2Q0VG99 397 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 SOWAHAQ2M3V2 549 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms