RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 SLC38A8A6NNN8 435 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 BECN2A8MW95 431 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 F8VP50 259 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 PES1O00541 588 aaKnown RBP14.66□□□□□ -0.06
SNRPA-208ENST00000600456 PAEPP09466 180 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 FAM200BP0CF97 657 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 MYL4P12829 197 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 LAMP2P13473 410 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 CCDC130P13994 396 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 HMGA1P17096 107 aaKnown RBP14.66□□□□□ -0.06
SNRPA-208ENST00000600456 SLC9A1P19634 815 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 CDK11BP21127 795 aaKnown RBP14.66□□□□□ -0.06
SNRPA-208ENST00000600456 ACO1P21399 889 aaKnown RBP14.66□□□□□ -0.06
SNRPA-208ENST00000600456 PON1P27169 355 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 CDC25CP30307 473 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 GPR15P49685 360 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 MFAP3P55082 362 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 SLC5A9Q2M3M2 681 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 ZNF394Q53GI3 561 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 FKBP15Q5T1M5 1219 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 ARHGAP17Q68EM7 881 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 RRAGAQ7L523 313 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 DHX40Q8IX18 779 aaKnown RBP14.66□□□□□ -0.06
SNRPA-208ENST00000600456 NPAS3Q8IXF0 933 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 HS6ST3Q8IZP7 471 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 C12orf29Q8N999 325 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 SLC4A11Q8NBS3 891 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 ITFG1Q8TB96 612 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 GIPC2Q8TF65 315 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 FGF13Q92913 245 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 CYFIP2Q96F07 1278 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 HEXIM2Q96MH2 286 aaKnown RBP14.66□□□□□ -0.06
SNRPA-208ENST00000600456 GCNAQ96QF7 691 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 MYADMQ96S97 322 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 GPR88Q9GZN0 384 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 HSD3B7Q9H2F3 369 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 FAM49BQ9NUQ9 324 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 UXTQ9UBK9 157 aaPredicted RBP14.66□□□□□ -0.06
SNRPA-208ENST00000600456 CNTN6Q9UQ52 1028 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 A0A0C4DFX4 3053 aa14.66□□□□□ -0.06
SNRPA-208ENST00000600456 CLDN5O00501 218 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 AP1G2O75843 785 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 RFX1P22670 979 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 SP100P23497 879 aaPredicted RBP14.65□□□□□ -0.06
SNRPA-208ENST00000600456 CCR2P41597 374 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 COPB1P53618 953 aaKnown RBP14.65□□□□□ -0.06
SNRPA-208ENST00000600456 IQCB1Q15051 598 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 TMEM270Q6UE05 265 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 DENND5BQ6ZUT9 1274 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 SHKBP1Q8TBC3 707 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 GPR152Q8TDT2 470 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 KAT5Q92993 513 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 NXPE3Q969Y0 559 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 KREMEN1Q96MU8 473 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 VPS16Q9H269 839 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 CSNK1G1Q9HCP0 422 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 ZNF334Q9HCZ1 680 aaPredicted RBP14.65□□□□□ -0.06
SNRPA-208ENST00000600456 UBE2TQ9NPD8 197 aaPredicted RBP14.65□□□□□ -0.06
SNRPA-208ENST00000600456 CD320Q9NPF0 282 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 KRT82Q9NSB4 513 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 ZMYM5Q9UJ78 669 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 PCDHB4Q9Y5E5 795 aa14.65□□□□□ -0.06
SNRPA-208ENST00000600456 TCF20Q9UGU0 1960 aaKnown RBP14.64□□□□□ -0.07
SNRPA-208ENST00000600456 SOBPA7XYQ1 873 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 LGALS16A8MUM7 142 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 MOSPD3O75425 235 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 VDRP11473 427 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 CEBPBP17676 345 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 GABRR2P28476 465 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 ADORA2BP29275 332 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 ZNF132P52740 706 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 CACNA2D1P54289 1103 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 TPM4P67936 248 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 ARHGAP15Q53QZ3 475 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 SGO2Q562F6 1265 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 SDHAF4Q5VUM1 108 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 GAREM2Q75VX8 874 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 MTSS1LQ765P7 747 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 RNF135Q8IUD6 432 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 RBBP8NLQ8NC74 664 aaPredicted RBP14.64□□□□□ -0.07
SNRPA-208ENST00000600456 ING5Q8WYH8 240 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 TCEAL4Q96EI5 215 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 TTLL2Q9BWV7 592 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 IL21Q9HBE4 155 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 CBX8Q9HC52 389 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 PNPLA8Q9NP80 782 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 SIX2Q9NPC8 291 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 TMEM30AQ9NV96 361 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 COMMD8Q9NX08 183 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 IGSF9Q9P2J2 1179 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 BDP1A6H8Y1 2624 aa14.64□□□□□ -0.07
SNRPA-208ENST00000600456 A0A1W2PRU2 124 aa14.63□□□□□ -0.07
SNRPA-208ENST00000600456 ANHXE9PGG2 379 aa14.63□□□□□ -0.07
SNRPA-208ENST00000600456 TNFRSF10AO00220 468 aa14.63□□□□□ -0.07
SNRPA-208ENST00000600456 RTN3O95197 1032 aaPredicted RBP14.63□□□□□ -0.07
SNRPA-208ENST00000600456 CD19P15391 556 aa14.63□□□□□ -0.07
SNRPA-208ENST00000600456 NPR3P17342 541 aa14.63□□□□□ -0.07
SNRPA-208ENST00000600456 PPP3CCP48454 512 aa14.63□□□□□ -0.07
SNRPA-208ENST00000600456 SLC8A3P57103 927 aa14.63□□□□□ -0.07
SNRPA-208ENST00000600456 MTMR3Q13615 1198 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms