RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 MMP19Q99542 508 aa16.83■□□□□ 0.28
SYDE1-204ENST00000600440 WWP1Q9H0M0 922 aa16.83■□□□□ 0.28
SYDE1-204ENST00000600440 SRP68Q9UHB9 627 aaKnown RBP16.83■□□□□ 0.28
SYDE1-204ENST00000600440 SOX13Q9UN79 622 aa16.83■□□□□ 0.28
SYDE1-204ENST00000600440 TCRBV7S3A2A0A539 114 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 PEX1O43933 1283 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 TOM1L1O75674 476 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 STAMBPO95630 424 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 CFHP08603 1231 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 SMIM18P0DKX4 95 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 GTF2H1P32780 548 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 CLEC16AQ2KHT3 1053 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 TMC7Q7Z402 723 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 ZBTB8BQ8NAP8 495 aaPredicted RBP16.82■□□□□ 0.28
SYDE1-204ENST00000600440 GSDMBQ8TAX9 411 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 CFAP36Q96G28 342 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 NT5C1BQ96P26 610 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 CSRNP1Q96S65 589 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 SRPK1Q96SB4 655 aaKnown RBP16.82■□□□□ 0.28
SYDE1-204ENST00000600440 SENP7Q9BQF6 1050 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 ATRNL1Q5VV63 1379 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 XPO1O14980 1071 aaKnown RBP16.82■□□□□ 0.28
SYDE1-204ENST00000600440 TLR3O15455 904 aaKnown RBP16.82■□□□□ 0.28
SYDE1-204ENST00000600440 TOP3BO95985 862 aaKnown RBP16.82■□□□□ 0.28
SYDE1-204ENST00000600440 ITPK1Q13572 414 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 KBTBD12Q3ZCT8 623 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 HSF5Q4G112 596 aaPredicted RBP16.82■□□□□ 0.28
SYDE1-204ENST00000600440 PPP6R3Q5H9R7 873 aaPredicted RBP16.82■□□□□ 0.28
SYDE1-204ENST00000600440 TMCO4Q5TGY1 634 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 CC2D2BQ6DHV5 1058 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 UGT2A3Q6UWM9 527 aa16.82■□□□□ 0.28
SYDE1-204ENST00000600440 WRAP73Q9P2S5 460 aaPredicted RBP16.82■□□□□ 0.28
SYDE1-204ENST00000600440 A0A1B0GTW7 788 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 CAPN14A8MX76 684 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 NDC80O14777 642 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 ATP9BO43861 1147 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 FOXD2O60548 495 aaPredicted RBP16.81■□□□□ 0.28
SYDE1-204ENST00000600440 ADRB2P07550 413 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 LMNB2Q03252 620 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 PDE1CQ14123 709 aaPredicted RBP16.81■□□□□ 0.28
SYDE1-204ENST00000600440 MORF4L2Q15014 288 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 PDK1Q15118 436 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 SF3B3Q15393 1217 aaKnown RBP16.81■□□□□ 0.28
SYDE1-204ENST00000600440 RNASEH2BQ5TBB1 312 aaKnown RBP16.81■□□□□ 0.28
SYDE1-204ENST00000600440 ZBTB46Q86UZ6 589 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 RELL1Q8IUW5 271 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 NUDCD3Q8IVD9 361 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 DEFB107AQ8IZN7 70 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 XXYLT1Q8NBI6 393 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 SHC3Q92529 594 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 E2F7Q96AV8 911 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 FIZ1Q96SL8 496 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 IFT122Q9HBG6 1241 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 UBAP1Q9NZ09 502 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 VAV3Q9UKW4 847 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 TRIM49D1C9J1S8 452 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 PROSCO94903 275 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 CCNIQ14094 377 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 C1orf220Q5T0J3 134 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 AMIGO2Q86SJ2 522 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 CRLF3Q8IUI8 442 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 DCAKDQ8WVC6 231 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 ANLNQ9NQW6 1124 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 GOLGB1Q14789 3259 aaKnown RBP16.81■□□□□ 0.28
SYDE1-204ENST00000600440 SRGAP2CP0DJJ0 459 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 SRGAP2BP0DMP2 458 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 NCF2P19878 526 aaPredicted RBP16.81■□□□□ 0.28
SYDE1-204ENST00000600440 GDF10P55107 478 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 C16orf72Q14CZ0 275 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 KLHL38Q2WGJ6 581 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 ADGRD1Q6QNK2 874 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 APOPT1Q96IL0 206 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 BTG4Q9NY30 223 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 TBC1D30Q9Y2I9 924 aa16.81■□□□□ 0.28
SYDE1-204ENST00000600440 COL5A2P05997 1499 aaPredicted RBP16.8■□□□□ 0.28
SYDE1-204ENST00000600440 LYPLA1O75608 230 aaPredicted RBP16.8■□□□□ 0.28
SYDE1-204ENST00000600440 CFBP00751 764 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 FDFT1P37268 417 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 STT3AP46977 705 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 KRT81Q14533 505 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 NFIXQ14938 502 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 SMTNL2Q2TAL5 461 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 HSP90AA5PQ58FG0 334 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 MFSD14BQ5SR56 506 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 TXNRD3NBQ6F5E7 133 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 CIDEBQ9UHD4 219 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 IQANK1A0A1B0GTG1 560 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 TMEM150BA6NC51 233 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 TRIM43BA6NCK2 446 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 GAS7O60861 476 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 TRMUO75648 421 aaKnown RBP16.8■□□□□ 0.28
SYDE1-204ENST00000600440 CYP3A4P08684 503 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 SLC5A2P31639 672 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 STIP1P31948 543 aaKnown RBP16.8■□□□□ 0.28
SYDE1-204ENST00000600440 NAA20P61599 178 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 C6orf52Q5T4I8 152 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 GRAMD4Q6IC98 578 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 ALLCQ8N6M5 410 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 KIFC3Q9BVG8 833 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 GPAMQ9HCL2 828 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms