RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 SPOPLQ6IQ16 392 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 IZUMO2Q6UXV1 221 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 TRMT1LQ7Z2T5 733 aaKnown RBP19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 DRAXINQ8NBI3 349 aaPredicted RBP19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 BSNDQ8WZ55 320 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 ECSITQ9BQ95 431 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 VCX3BQ9H321 246 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 GPAMQ9HCL2 828 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 VCX3AQ9NNX9 186 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 GINM1Q9NU53 330 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 NDE1Q9NXR1 346 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 ARMCX1Q9P291 453 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 TCEAL9Q9UHQ7 104 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 HERC5Q9UII4 1024 aaKnown RBP19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 FAM237BA0A1B0GVD1 139 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 PIAS1O75925 651 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 SFNP31947 248 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 SSTR3P32745 418 aaPredicted RBP19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 BBS9Q3SYG4 887 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 SH2D5Q6ZV89 423 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 SERAC1Q96JX3 654 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 FAM84AQ96KN4 292 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 DBNDD1Q9H9R9 158 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 PCMTD2Q9NV79 361 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 COL20A1Q9P218 1284 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 ANKRD31Q8N7Z5 1873 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 ARID2Q68CP9 1835 aa19.51■□□□□ 0.71
ARHGEF1-221ENST00000600387 C2orf71A6NGG8 1288 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 WDR64B1ANS9 1081 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 I3L4J1 428 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 POLRMTO00411 1230 aaKnown RBP19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 ACTR3P61158 418 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 TBCCQ15814 346 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 LMBRD2Q68DH5 695 aaPredicted RBP19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 DNAJC24Q6P3W2 148 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 DCUN1D2Q6PH85 259 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 RIPOR1Q6ZS17 1223 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 ALYREFQ86V81 257 aaKnown RBP19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 SLC44A1Q8WWI5 657 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 RSAD2Q8WXG1 361 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 NCSTNQ92542 709 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 C7orf26Q96N11 449 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 MCEEQ96PE7 176 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 CENPKQ9BS16 269 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 FEM1BQ9UK73 627 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 PLA2G4CQ9UP65 541 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 ATP5BP06576 529 aaKnown RBP19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 INHBAP08476 426 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 RPL22P35268 128 aaKnown RBP19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 PSMC4P43686 418 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 CPA2P48052 419 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 ZNF200P98182 395 aaPredicted RBP19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 OTUD4Q01804 1114 aaKnown RBP19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 CDK18Q07002 472 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 VPS72Q15906 364 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 RASIP1Q5U651 963 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 TXNRD3NBQ6F5E7 133 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 ARHGAP22Q7Z5H3 698 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 POLNQ7Z5Q5 900 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 NIPA2Q8N8Q9 360 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 RBM15BQ8NDT2 890 aaKnown RBP19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 ACTL9Q8TC94 416 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 PPP2R3CQ969Q6 453 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 IQCGQ9H095 443 aaKnown RBP19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 TAGLN3Q9UI15 199 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 XPO7Q9UIA9 1087 aaKnown RBP19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 KCNG1Q9UIX4 513 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 AGTPBP1Q9UPW5 1226 aa19.5■□□□□ 0.71
ARHGEF1-221ENST00000600387 TCRBV5S1A1TA0A578 114 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 SPECC1L-ADORA2AF8WAN1 911 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 VNN1O95497 513 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 ENO1P06733 434 aaKnown RBP19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 PYGBP11216 843 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 GDF10P55107 478 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 MRPS9P82933 396 aaKnown RBP19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 ULK2Q8IYT8 1036 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 PANX3Q96QZ0 392 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 SPATA16Q9BXB7 569 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 WWP1Q9H0M0 922 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 APOBEC3GQ9HC16 384 aaKnown RBP19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 FKBP6O75344 327 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 SPAG6O75602 509 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 ZCCHC18P0CG32 403 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 ABCD1P33897 745 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 CDK7P50613 346 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 SH3BGRP55822 239 aaPredicted RBP19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 CNPY1Q3B7I2 92 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 DACT2Q5SW24 774 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 ATG16L1Q676U5 607 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 SAMD1Q6SPF0 538 aaPredicted RBP19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 RFX8Q6ZV50 586 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 ANO5Q75V66 913 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 ZNF606Q8WXB4 792 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 OLFM3Q96PB7 478 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 EPAS1Q99814 870 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 TDRD3Q9H7E2 651 aaKnown RBP19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 CCPG1Q9ULG6 757 aa19.49■□□□□ 0.71
ARHGEF1-221ENST00000600387 SCN9AQ15858 1988 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms