RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 MANSC1Q9H8J5 431 aa10.28□□□□□ -0.76
NFKB1-212ENST00000600343 FANCEQ9HB96 536 aa10.28□□□□□ -0.76
NFKB1-212ENST00000600343 MOV10Q9HCE1 1003 aaKnown RBP10.28□□□□□ -0.76
NFKB1-212ENST00000600343 GNEQ9Y223 722 aaKnown RBP10.28□□□□□ -0.76
NFKB1-212ENST00000600343 ILVBLA1L0T0 632 aa10.27□□□□□ -0.76
NFKB1-212ENST00000600343 POC1B-GALNT4F8VUJ3 575 aa10.27□□□□□ -0.76
NFKB1-212ENST00000600343 CCRL2O00421 344 aa10.27□□□□□ -0.76
NFKB1-212ENST00000600343 CHRNB2P17787 502 aa10.27□□□□□ -0.76
NFKB1-212ENST00000600343 CTNNA2P26232 953 aa10.27□□□□□ -0.76
NFKB1-212ENST00000600343 PTK2BQ14289 1009 aa10.27□□□□□ -0.76
NFKB1-212ENST00000600343 EPHA7Q15375 998 aa10.27□□□□□ -0.76
NFKB1-212ENST00000600343 RARS2Q5T160 578 aaKnown RBP10.27□□□□□ -0.76
NFKB1-212ENST00000600343 FAM91A1Q658Y4 838 aa10.27□□□□□ -0.76
NFKB1-212ENST00000600343 ZNF598Q86UK7 904 aaKnown RBP10.27□□□□□ -0.76
NFKB1-212ENST00000600343 SLC51BQ86UW2 128 aa10.27□□□□□ -0.76
NFKB1-212ENST00000600343 ZBTB46Q86UZ6 589 aa10.27□□□□□ -0.76
NFKB1-212ENST00000600343 SLC15A4Q8N697 577 aa10.27□□□□□ -0.76
NFKB1-212ENST00000600343 FANCBQ8NB91 859 aa10.27□□□□□ -0.76
NFKB1-212ENST00000600343 SENP1Q9P0U3 644 aa10.27□□□□□ -0.76
NFKB1-212ENST00000600343 STK39Q9UEW8 545 aa10.27□□□□□ -0.76
NFKB1-212ENST00000600343 NCKAP5LQ9HCH0 1330 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 H7C0C1 242 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 B4GALT4O60513 344 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 SEC24DO94855 1032 aaPredicted RBP10.27□□□□□ -0.77
NFKB1-212ENST00000600343 ADRA1DP25100 572 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 BNIP3Q12983 259 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 SLC15A2Q16348 729 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 TTC13Q8NBP0 860 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 SLC35G2Q8TBE7 412 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 TRUB1Q8WWH5 349 aaKnown RBP10.27□□□□□ -0.77
NFKB1-212ENST00000600343 ZNF486Q96H40 463 aaPredicted RBP10.27□□□□□ -0.77
NFKB1-212ENST00000600343 C9orf72Q96LT7 481 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 ZNF512Q96ME7 567 aaPredicted RBP10.27□□□□□ -0.77
NFKB1-212ENST00000600343 TSG101Q99816 390 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 C12orf10Q9HB07 376 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 COMMD8Q9NX08 183 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 CDH7Q9ULB5 785 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 GOLGA8QA0A0J9YX86 632 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 GOLGA8OA6NCC3 632 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 GOLGA8NF8WBI6 632 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 GOLGA8RI6L899 631 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 TAF4O00268 1085 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 TNPO2O14787 897 aaKnown RBP10.27□□□□□ -0.77
NFKB1-212ENST00000600343 CSPG5O95196 566 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 KRT6AP02538 564 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 KRT6BP04259 564 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 PRKCAP17252 672 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 ABCB4P21439 1286 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 NKX2-5P52952 324 aaPredicted RBP10.27□□□□□ -0.77
NFKB1-212ENST00000600343 CREB5Q02930 508 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 NIPAL4Q0D2K0 466 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 OXA1LQ15070 435 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 SEL1L2Q5TEA6 688 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 SCARA3Q6AZY7 606 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 IRF2BP2Q7Z5L9 587 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 PRPF39Q86UA1 669 aaKnown RBP10.27□□□□□ -0.77
NFKB1-212ENST00000600343 SEPT12Q8IYM1 358 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 CLIP4Q8N3C7 705 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 ALG13Q9NP73 1137 aaKnown RBP10.27□□□□□ -0.77
NFKB1-212ENST00000600343 ANKMY1Q9P2S6 941 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 SOX13Q9UN79 622 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 B3GNT3Q9Y2A9 372 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 CORINQ9Y5Q5 1042 aa10.27□□□□□ -0.77
NFKB1-212ENST00000600343 DCAF8L1A6NGE4 600 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 IDH3BO43837 385 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 FKBP9O95302 570 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 PSMC3P17980 439 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 ZNF135P52742 658 aaPredicted RBP10.26□□□□□ -0.77
NFKB1-212ENST00000600343 GALCP54803 685 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 P2RX3P56373 397 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 HSPA14Q0VDF9 509 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 RABL6Q3YEC7 729 aaPredicted RBP10.26□□□□□ -0.77
NFKB1-212ENST00000600343 CYP4F22Q6NT55 531 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 ELMOD2Q8IZ81 293 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 MIGA1Q8NAN2 632 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 ARMC1Q9NVT9 282 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 CAPN14A8MX76 684 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 ATE1O95260 518 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 KRT10P13645 584 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 ITIH2P19823 946 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 GNG2P59768 71 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 DLG4P78352 724 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 GNA12Q03113 381 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 KRT17Q04695 432 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 GCKRQ14397 625 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 LSM12Q3MHD2 195 aaKnown RBP10.26□□□□□ -0.77
NFKB1-212ENST00000600343 LRRC55Q6ZSA7 311 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 SETD3Q86TU7 594 aaPredicted RBP10.26□□□□□ -0.77
NFKB1-212ENST00000600343 GALNT6Q8NCL4 622 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.26□□□□□ -0.77
NFKB1-212ENST00000600343 PGBD4Q96DM1 585 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 MRRFQ96E11 262 aaKnown RBP10.26□□□□□ -0.77
NFKB1-212ENST00000600343 LRGUKQ96M69 825 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 PWWP2AQ96N64 755 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 MRPL9Q9BYD2 267 aaKnown RBP10.26□□□□□ -0.77
NFKB1-212ENST00000600343 DCLK3Q9C098 648 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 SEPT10Q9P0V9 454 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 PPP1R1BQ9UD71 204 aaPredicted RBP10.26□□□□□ -0.77
NFKB1-212ENST00000600343 COL4A3BPQ9Y5P4 624 aa10.26□□□□□ -0.77
NFKB1-212ENST00000600343 IGSF1Q8N6C5 1336 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms