RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 ETV4P43268 484 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 RARRES1P49788 294 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 GCNT1Q02742 428 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 KDSRQ06136 332 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 CCDC174Q6PII3 467 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 CDAN1Q8IWY9 1227 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 ULK2Q8IYT8 1036 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 SLC25A41Q8N5S1 370 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 SERAC1Q96JX3 654 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 C10orf88Q9H8K7 445 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 ZWILCHQ9H900 591 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 MRPL47Q9HD33 250 aaKnown RBP20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 DRG1Q9Y295 367 aaKnown RBP20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 ZHX2Q9Y6X8 837 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 MYH9P35579 1960 aaKnown RBP20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 SPATA31D3P0C874 917 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 C6orf163Q5TEZ5 329 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 SPATA31D4Q6ZUB0 917 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 CHSY1Q86X52 802 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 ZBED3Q96IU2 234 aaPredicted RBP20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 KIFC3Q9BVG8 833 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 PLA2G4CQ9UP65 541 aa20.23■□□□□ 0.83
ARHGEF1-218ENST00000599589 PYGBP11216 843 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 ACTR3P61158 418 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 TRMT5Q32P41 509 aaKnown RBP20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 RAPH1Q70E73 1250 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 MARK2Q7KZI7 788 aaKnown RBP20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 FAM160B2Q86V87 743 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 PPP2R3CQ969Q6 453 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 HAPLN3Q96S86 360 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 CCDC28BQ9BUN5 200 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 PCDH9Q9HC56 1237 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 C1orf112Q9NSG2 853 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 SLC7A8Q9UHI5 535 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 FARP1Q9Y4F1 1045 aaPredicted RBP20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 CAPN14A8MX76 684 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 TM7SF2O76062 418 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 USP4Q13107 963 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 LSAMPQ13449 338 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 PABPC1LQ4VXU2 614 aaKnown RBP20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 C1orf146Q5VVC0 180 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 FAM91A1Q658Y4 838 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 ZNF677Q86XU0 584 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 PALM2Q8IXS6 379 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 GINM1Q9NU53 330 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 PPARGC1AQ9UBK2 798 aaKnown RBP20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 PGAP2Q9UHJ9 254 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 IVNS1ABPQ9Y6Y0 642 aa20.22■□□□□ 0.83
ARHGEF1-218ENST00000599589 ZNF536O15090 1300 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 PDLIM1O00151 329 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 WNT10BO00744 389 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 TGFB2P61812 414 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 RPL7AP62424 266 aaKnown RBP20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 MAP3K10Q02779 954 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 SPOCD1Q6ZMY3 1216 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 ST13P4Q8IZP2 240 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 SMC1BQ8NDV3 1235 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 G3BP2Q9UN86 482 aaKnown RBP20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 MRPL11Q9Y3B7 192 aaKnown RBP20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 COMMD3-BMI1R4GMX3 469 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 GOLGB1Q14789 3259 aaKnown RBP20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 MCCD1P59942 119 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 SNRPFP62306 86 aaKnown RBP20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 ZYXQ15942 572 aaKnown RBP20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 CIAPIN1Q6FI81 312 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 PLEKHA7Q6IQ23 1121 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 ENOSF1Q7L5Y1 443 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 CPT1BQ92523 772 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 APOPT1Q96IL0 206 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 IL1RAPL1Q9NZN1 696 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 ATXN10Q9UBB4 475 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 FEM1BQ9UK73 627 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 STRIP2Q9ULQ0 834 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 PHF24Q9UPV7 400 aa20.21■□□□□ 0.83
ARHGEF1-218ENST00000599589 ITGAVP06756 1048 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 ASNSP08243 561 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 NCKAP1LP55160 1127 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 NOMO3P69849 1222 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 BBS9Q3SYG4 887 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 HSF5Q4G112 596 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 TXNRD3NBQ6F5E7 133 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 SDCCAG8Q86SQ7 713 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 SENP7Q9BQF6 1050 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 ST6GALNAC4Q9H4F1 302 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 SAE1Q9UBE0 346 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 TBX20Q9UMR3 447 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 TBC1D30Q9Y2I9 924 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 DCAF8L1A6NGE4 600 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 BUD23O43709 281 aaKnown RBP20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 OPHN1O60890 802 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 P4HBP07237 508 aaKnown RBP20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 CYP24A1Q07973 514 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 PTK7Q13308 1070 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 FAM102BQ5T8I3 360 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 PPIL6Q8IXY8 311 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 FEZF2Q8TBJ5 459 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 TMC2Q8TDI7 906 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 MFSD14AQ96MC6 490 aa20.2■□□□□ 0.82
ARHGEF1-218ENST00000599589 OLFM3Q96PB7 478 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms