RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 CNTNAP2Q9UHC6 1331 aa15.4■□□□□ 0.06
SYMPK-213ENST00000599460 MAPK13O15264 365 aa15.4■□□□□ 0.06
SYMPK-213ENST00000599460 NOL3O60936 208 aaKnown RBP15.4■□□□□ 0.06
SYMPK-213ENST00000599460 MICAL2O94851 1124 aa15.4■□□□□ 0.06
SYMPK-213ENST00000599460 SLC11A2P49281 568 aa15.4■□□□□ 0.06
SYMPK-213ENST00000599460 C1QBPQ07021 282 aaKnown RBP15.4■□□□□ 0.06
SYMPK-213ENST00000599460 LONRF1Q17RB8 773 aa15.4■□□□□ 0.06
SYMPK-213ENST00000599460 TFDP3Q5H9I0 405 aa15.4■□□□□ 0.06
SYMPK-213ENST00000599460 IPMKQ8NFU5 416 aa15.4■□□□□ 0.06
SYMPK-213ENST00000599460 ISCUQ9H1K1 167 aa15.4■□□□□ 0.06
SYMPK-213ENST00000599460 GJB1P08034 283 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 ATXN8OSP0DMR3 200 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 MRPS6P82932 125 aaKnown RBP15.39■□□□□ 0.05
SYMPK-213ENST00000599460 ELAVL2Q12926 359 aaKnown RBP15.39■□□□□ 0.05
SYMPK-213ENST00000599460 PDK2Q15119 407 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 LRRC55Q6ZSA7 311 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 CDC26Q8NHZ8 85 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 RPRD1AQ96P16 312 aaPredicted RBP15.39■□□□□ 0.05
SYMPK-213ENST00000599460 ZBTB48P10074 688 aaPredicted RBP15.39■□□□□ 0.05
SYMPK-213ENST00000599460 DNAJB2P25686 324 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 BEND6Q5SZJ8 279 aaPredicted RBP15.39■□□□□ 0.05
SYMPK-213ENST00000599460 SPRYD7Q5W111 196 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 ABHD15Q6UXT9 468 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 UPF1Q92900 1129 aaKnown RBP eCLIP15.39■□□□□ 0.05
SYMPK-213ENST00000599460 CHMP6Q96FZ7 201 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 ACO2Q99798 780 aaKnown RBP15.39■□□□□ 0.05
SYMPK-213ENST00000599460 FKTNO75072 461 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 MAP3K6O95382 1288 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 EIF4BP23588 611 aaKnown RBP15.39■□□□□ 0.05
SYMPK-213ENST00000599460 FNTAP49354 379 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 NCKAP1LP55160 1127 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 FAM131BQ86XD5 332 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 PPTC7Q8NI37 304 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 DPF3Q92784 378 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 BHMTQ93088 406 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 GAD1Q99259 594 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 SNCAIPQ9Y6H5 919 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 LRRC10BA6NIK2 292 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 MTSS1O43312 755 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 CCNE2O96020 404 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 SESN3P58005 492 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 NFE2Q16621 373 aaPredicted RBP15.39■□□□□ 0.05
SYMPK-213ENST00000599460 ARSHQ5FYA8 562 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 SPDYE1Q8NFV5 336 aaPredicted RBP15.39■□□□□ 0.05
SYMPK-213ENST00000599460 PCDHB8Q9UN66 801 aa15.39■□□□□ 0.05
SYMPK-213ENST00000599460 MBL2P11226 248 aaPredicted RBP15.38■□□□□ 0.05
SYMPK-213ENST00000599460 EFEMP1Q12805 493 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 PHLDB3Q6NSJ2 640 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 NUDCD3Q8IVD9 361 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 KLHL29Q96CT2 875 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 TUBB6Q9BUF5 446 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 TXLNGQ9NUQ3 528 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 SIK3Q9Y2K2 1263 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 SCN11AQ9UI33 1791 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 DOT1LQ8TEK3 1739 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 H0Y626 953 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 GOLGA8RI6L899 631 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 MAGEA4P43358 317 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 FLT3LGP49771 235 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 OCRLQ01968 901 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 FASTKD1Q53R41 847 aaKnown RBP15.38■□□□□ 0.05
SYMPK-213ENST00000599460 MEI1Q5TIA1 1274 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 FAM171A1Q5VUB5 890 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 PPIL6Q8IXY8 311 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 TGS1Q96RS0 853 aaKnown RBP15.38■□□□□ 0.05
SYMPK-213ENST00000599460 ZCCHC17Q9NP64 241 aaKnown RBP15.38■□□□□ 0.05
SYMPK-213ENST00000599460 COL20A1Q9P218 1284 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 PCDHB12Q9Y5F1 795 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 NID2Q14112 1375 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 RGPD1P0DJD0 1748 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 NVLO15381 856 aaKnown RBP15.38■□□□□ 0.05
SYMPK-213ENST00000599460 NAA25Q14CX7 972 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 HSDL1Q3SXM5 330 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 CCDC33Q8N5R6 958 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 CLEC4DQ8WXI8 215 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 PPP1R2P1Q96PQ5 205 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 GPR20Q99678 358 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 IRAK4Q9NWZ3 460 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 AP4E1Q9UPM8 1137 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 HES2Q9Y543 173 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 DLK2Q6UY11 383 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 TBC1D1Q86TI0 1168 aaPredicted RBP15.38■□□□□ 0.05
SYMPK-213ENST00000599460 TRABDQ9H4I3 376 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 COL1A1P02452 1464 aaPredicted RBP15.38■□□□□ 0.05
SYMPK-213ENST00000599460 A0A0G2JLL6 359 aaPredicted RBP15.38■□□□□ 0.05
SYMPK-213ENST00000599460 PAEPP09466 180 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 MLH1P40692 756 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 TNFSF9P41273 254 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 TWF1Q12792 350 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 MIIPQ5JXC2 388 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 PAPD7Q5XG87 772 aaKnown RBP15.38■□□□□ 0.05
SYMPK-213ENST00000599460 C4orf22Q6V702 233 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 PRRT2Q7Z6L0 340 aaPredicted RBP15.38■□□□□ 0.05
SYMPK-213ENST00000599460 EGFL8Q99944 293 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 CPSF2Q9P2I0 782 aaKnown RBP15.38■□□□□ 0.05
SYMPK-213ENST00000599460 FAM8A1Q9UBU6 413 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 AFF4Q9UHB7 1163 aaKnown RBP15.38■□□□□ 0.05
SYMPK-213ENST00000599460 ATRNL1Q5VV63 1379 aa15.38■□□□□ 0.05
SYMPK-213ENST00000599460 F5H5T6 163 aa15.37■□□□□ 0.05
SYMPK-213ENST00000599460 LYPLA2O95372 231 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms