RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 STKLD1Q8NE28 680 aa24.57■■□□□ 1.52
SSBP4-205ENST00000598159 TMC2Q8TDI7 906 aa24.57■■□□□ 1.52
SSBP4-205ENST00000598159 PCED1BQ96HM7 432 aa24.57■■□□□ 1.52
SSBP4-205ENST00000598159 ZFYVE19Q96K21 471 aa24.57■■□□□ 1.52
SSBP4-205ENST00000598159 SMG9Q9H0W8 520 aaKnown RBP24.57■■□□□ 1.52
SSBP4-205ENST00000598159 CHRDQ9H2X0 955 aa24.57■■□□□ 1.52
SSBP4-205ENST00000598159 EHD2Q9NZN4 543 aa24.57■■□□□ 1.52
SSBP4-205ENST00000598159 R4GN57 208 aa24.57■■□□□ 1.52
SSBP4-205ENST00000598159 FANCMQ8IYD8 2048 aa24.56■■□□□ 1.52
SSBP4-205ENST00000598159 IKBKBO14920 756 aa24.56■■□□□ 1.52
SSBP4-205ENST00000598159 LMNAP02545 664 aaKnown RBP24.56■■□□□ 1.52
SSBP4-205ENST00000598159 PRR29P0C7W0 189 aa24.56■■□□□ 1.52
SSBP4-205ENST00000598159 ANXA13P27216 316 aa24.56■■□□□ 1.52
SSBP4-205ENST00000598159 ZNF268Q14587 947 aaPredicted RBP24.56■■□□□ 1.52
SSBP4-205ENST00000598159 KCNB1Q14721 858 aa24.56■■□□□ 1.52
SSBP4-205ENST00000598159 USP13Q92995 863 aaPredicted RBP24.56■■□□□ 1.52
SSBP4-205ENST00000598159 GKN1Q9NS71 199 aa24.56■■□□□ 1.52
SSBP4-205ENST00000598159 GTSE1Q9NYZ3 720 aa24.56■■□□□ 1.52
SSBP4-205ENST00000598159 PATJQ8NI35 1801 aa24.56■■□□□ 1.52
SSBP4-205ENST00000598159 OBSL1O75147 1896 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 PTPRZ1P23471 2315 aaPredicted RBP24.55■■□□□ 1.52
SSBP4-205ENST00000598159 A8MXQ7 604 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 SPECC1L-ADORA2AF8WAN1 911 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 TRIM66O15016 1216 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 MAPK13O15264 365 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 CHRNB1P11230 501 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 MTAPQ13126 283 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 NCOA4Q13772 614 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 NFIL3Q16649 462 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 ZNF667Q5HYK9 610 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 MDH1BQ5I0G3 518 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 CEP135Q66GS9 1140 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 FAM83CQ9BQN1 747 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 GOLPH3LQ9H4A5 285 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 GDPD2Q9HCC8 539 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 NME7Q9Y5B8 376 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 GREB1Q4ZG55 1949 aa24.55■■□□□ 1.52
SSBP4-205ENST00000598159 USP34Q70CQ2 3546 aa24.54■■□□□ 1.52
SSBP4-205ENST00000598159 TADA3O75528 432 aa24.54■■□□□ 1.52
SSBP4-205ENST00000598159 CTHP32929 405 aa24.54■■□□□ 1.52
SSBP4-205ENST00000598159 NUCB2P80303 420 aa24.54■■□□□ 1.52
SSBP4-205ENST00000598159 SGSM1Q2NKQ1 1148 aa24.54■■□□□ 1.52
SSBP4-205ENST00000598159 ZNF699Q32M78 642 aa24.54■■□□□ 1.52
SSBP4-205ENST00000598159 ITPRIPL2Q3MIP1 535 aa24.54■■□□□ 1.52
SSBP4-205ENST00000598159 DENND5BQ6ZUT9 1274 aa24.54■■□□□ 1.52
SSBP4-205ENST00000598159 ADSSL1Q8N142 457 aa24.54■■□□□ 1.52
SSBP4-205ENST00000598159 GUF1Q8N442 669 aaKnown RBP24.54■■□□□ 1.52
SSBP4-205ENST00000598159 C8orf48Q96LL4 319 aa24.54■■□□□ 1.52
SSBP4-205ENST00000598159 CCL26Q9Y258 94 aa24.54■■□□□ 1.52
SSBP4-205ENST00000598159 PTPRDP23468 1912 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 VNN1O95497 513 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 USP17L7P0C7H9 530 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 P4HA1P13674 534 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 SOX9P48436 509 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 PPP3CCP48454 512 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 DLG4P78352 724 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 FAM160A1Q05DH4 1040 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 LRRC32Q14392 662 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 PPP2R5DQ14738 602 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 ZACNQ401N2 412 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 DGKKQ5KSL6 1271 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 CC2D1AQ6P1N0 951 aaPredicted RBP24.53■■□□□ 1.52
SSBP4-205ENST00000598159 B3GALNT2Q8NCR0 500 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 TTC8Q8TAM2 541 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 TAF4BQ92750 862 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 FAM126AQ9BYI3 521 aaPredicted RBP24.53■■□□□ 1.52
SSBP4-205ENST00000598159 PRMT8Q9NR22 394 aaPredicted RBP24.53■■□□□ 1.52
SSBP4-205ENST00000598159 PCDHGA2Q9Y5H1 932 aa24.53■■□□□ 1.52
SSBP4-205ENST00000598159 MYO15AQ9UKN7 3530 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 TRAV19A0A0A6YYK7 116 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 PFKLP17858 780 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 RPL13P26373 211 aaKnown RBP24.52■■□□□ 1.52
SSBP4-205ENST00000598159 PDE6CP51160 858 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 TNK2Q07912 1038 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 RUNX3Q13761 415 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 SV2AQ7L0J3 742 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 ATRIPQ8WXE1 791 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 NELL1Q92832 810 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 CYP2S1Q96SQ9 504 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 ELOVL4Q9GZR5 314 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 DPEP3Q9H4B8 488 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 TRPC7Q9HCX4 862 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 ZSCAN32Q9NX65 697 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 MAPK8IP1Q9UQF2 711 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 ANAPC1Q9H1A4 1944 aa24.52■■□□□ 1.52
SSBP4-205ENST00000598159 GOLGA6L4A6NEF3 574 aa24.51■■□□□ 1.51
SSBP4-205ENST00000598159 KINO60870 393 aaKnown RBP24.51■■□□□ 1.51
SSBP4-205ENST00000598159 CLSTN1O94985 981 aa24.51■■□□□ 1.51
SSBP4-205ENST00000598159 NR2F2P24468 414 aa24.51■■□□□ 1.51
SSBP4-205ENST00000598159 CCR3P51677 355 aa24.51■■□□□ 1.51
SSBP4-205ENST00000598159 VAMP7P51809 220 aa24.51■■□□□ 1.51
SSBP4-205ENST00000598159 NRLP54845 237 aa24.51■■□□□ 1.51
SSBP4-205ENST00000598159 CDH8P55286 799 aa24.51■■□□□ 1.51
SSBP4-205ENST00000598159 NOP14P78316 857 aaKnown RBP24.51■■□□□ 1.51
SSBP4-205ENST00000598159 TNIP3Q96KP6 325 aa24.51■■□□□ 1.51
SSBP4-205ENST00000598159 TTLL2Q9BWV7 592 aa24.51■■□□□ 1.51
SSBP4-205ENST00000598159 B3GNT5Q9BYG0 378 aa24.51■■□□□ 1.51
SSBP4-205ENST00000598159 TRPM5Q9NZQ8 1165 aa24.51■■□□□ 1.51
SSBP4-205ENST00000598159 GCNT4Q9P109 453 aa24.51■■□□□ 1.51
SSBP4-205ENST00000598159 RIF1Q5UIP0 2472 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms