RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 CUL2Q13617 745 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 DNAL1Q4LDG9 190 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 LRRC23Q53EV4 343 aaPredicted RBP13.18□□□□□ -0.3
ZNF558-205ENST00000597304 TXNRD3NBQ6F5E7 133 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 ULK2Q8IYT8 1036 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 NCSTNQ92542 709 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 PPP2R3CQ969Q6 453 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 OLFM3Q96PB7 478 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 MCEEQ96PE7 176 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 IRAK4Q9NWZ3 460 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 CNTN3Q9P232 1028 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 PPARGC1AQ9UBK2 798 aaKnown RBP13.18□□□□□ -0.3
ZNF558-205ENST00000597304 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.17□□□□□ -0.3
ZNF558-205ENST00000597304 E5RJQ4 531 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 F8VP50 259 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 PYGBP11216 843 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 ERFP50548 548 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 GDF10P55107 478 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 LIN52Q52LA3 116 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 MDH1BQ5I0G3 518 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 C1orf146Q5VVC0 180 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 NIPA1Q7RTP0 329 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 LDHDQ86WU2 507 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 TREML1Q86YW5 311 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 TAB3Q8N5C8 712 aaPredicted RBP13.17□□□□□ -0.3
ZNF558-205ENST00000597304 FBXO27Q8NI29 283 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 THTPAQ9BU02 230 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 TCEAL9Q9UHQ7 104 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 TAGLN3Q9UI15 199 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 ZNRF3Q9ULT6 936 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 PLA2G4CQ9UP65 541 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 AGTPBP1Q9UPW5 1226 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 CHMP2BQ9UQN3 213 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 LY75O60449 1722 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
ZNF558-205ENST00000597304 GYS1P13807 737 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 GARTP22102 1010 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 DYNLT1P63172 113 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 OTUD4Q01804 1114 aaKnown RBP13.17□□□□□ -0.3
ZNF558-205ENST00000597304 KDSRQ06136 332 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 TKFCQ3LXA3 575 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 ZACNQ401N2 412 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 TDRD10Q5VZ19 366 aaKnown RBP13.17□□□□□ -0.3
ZNF558-205ENST00000597304 DNAJC24Q6P3W2 148 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 DCUN1D2Q6PH85 259 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 ST13P4Q8IZP2 240 aaPredicted RBP13.17□□□□□ -0.3
ZNF558-205ENST00000597304 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.17□□□□□ -0.3
ZNF558-205ENST00000597304 IL31RAQ8NI17 732 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 ACER1Q8TDN7 264 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 RSAD2Q8WXG1 361 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 CLPTM1LQ96KA5 538 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 WWP1Q9H0M0 922 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 GPAMQ9HCL2 828 aa13.17□□□□□ -0.3
ZNF558-205ENST00000597304 XPO7Q9UIA9 1087 aaKnown RBP13.17□□□□□ -0.3
ZNF558-205ENST00000597304 TMEM63AO94886 807 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 MMP8P22894 467 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 RPL22P35268 128 aaKnown RBP13.16□□□□□ -0.3
ZNF558-205ENST00000597304 ZNF200P98182 395 aaPredicted RBP13.16□□□□□ -0.3
ZNF558-205ENST00000597304 FAAP100Q0VG06 881 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 MTMR1Q13613 665 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 CFAP157Q5JU67 520 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 TRIM42Q8IWZ5 723 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 ACTL9Q8TC94 416 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 SLC44A1Q8WWI5 657 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 SPIRE2Q8WWL2 714 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 BSNDQ8WZ55 320 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 MTBPQ96DY7 904 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 NDNQ99608 321 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 C10orf88Q9H8K7 445 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 ANKEF1Q9NU02 776 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 SLC7A8Q9UHI5 535 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 TCRBV7S3A2A0A539 114 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 COPEO14579 308 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 USP1O94782 785 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 CALB1P05937 261 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 HSD17B4P51659 736 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 MARK2Q7KZI7 788 aaKnown RBP13.16□□□□□ -0.3
ZNF558-205ENST00000597304 PRPF39Q86UA1 669 aaKnown RBP13.16□□□□□ -0.3
ZNF558-205ENST00000597304 FAM81AQ8TBF8 368 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 OPTNQ96CV9 577 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 C7orf26Q96N11 449 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 MRIQ9BWK5 157 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 UBE2OQ9C0C9 1292 aaKnown RBP13.16□□□□□ -0.3
ZNF558-205ENST00000597304 TBC1D22BQ9NU19 505 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 SAE1Q9UBE0 346 aaPredicted RBP13.16□□□□□ -0.3
ZNF558-205ENST00000597304 PPM1HQ9ULR3 514 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 TMX2Q9Y320 296 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 COMMD3-BMI1R4GMX3 469 aa13.16□□□□□ -0.3
ZNF558-205ENST00000597304 PDLIM1O00151 329 aa13.15□□□□□ -0.3
ZNF558-205ENST00000597304 FKBP6O75344 327 aa13.15□□□□□ -0.3
ZNF558-205ENST00000597304 C4BPAP04003 597 aaKnown RBP13.15□□□□□ -0.3
ZNF558-205ENST00000597304 SH3BGRP55822 239 aaPredicted RBP13.15□□□□□ -0.3
ZNF558-205ENST00000597304 OGDHQ02218 1023 aa13.15□□□□□ -0.3
ZNF558-205ENST00000597304 PIGHQ14442 188 aaPredicted RBP13.15□□□□□ -0.3
ZNF558-205ENST00000597304 KBTBD12Q3ZCT8 623 aa13.15□□□□□ -0.3
ZNF558-205ENST00000597304 TMCO4Q5TGY1 634 aa13.15□□□□□ -0.3
ZNF558-205ENST00000597304 ATG16L1Q676U5 607 aa13.15□□□□□ -0.3
ZNF558-205ENST00000597304 SH2D5Q6ZV89 423 aa13.15□□□□□ -0.3
ZNF558-205ENST00000597304 ACAD11Q709F0 780 aa13.15□□□□□ -0.3
ZNF558-205ENST00000597304 ARID3BQ8IVW6 561 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms