RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ATP8B3O60423 1300 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 SYCE3A1L190 88 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 F8VP50 259 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 NRG2O14511 850 aaPredicted RBP11.78□□□□□ -0.52
LIG1-211ENST00000596457 P4HA2O15460 535 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 CILPO75339 1184 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 AP1G2O75843 785 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 CSH1P0DML2 217 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 CSH2P0DML3 217 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 CACNA2D1P54289 1103 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 YWHAEP62258 255 aaKnown RBP11.78□□□□□ -0.52
LIG1-211ENST00000596457 ZXDAP98168 799 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 CYP4F8P98187 520 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 MAN2A1Q16706 1144 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 CFAP221Q4G0U5 840 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 PRSS36Q5K4E3 855 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 FAM35AQ86V20 835 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 TMC8Q8IU68 726 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 ARHGEF19Q8IW93 802 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 CRYBG2Q8N1P7 616 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 AOPEPQ8N6M6 819 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 SHKBP1Q8TBC3 707 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 SLC2A14Q8TDB8 520 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 WHAMMQ8TF30 809 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 KAT5Q92993 513 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 JAKMIP2Q96AA8 810 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 TMEM176AQ96HP8 235 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 GCNAQ96QF7 691 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 PHOX2BQ99453 314 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 LRRC3Q9BY71 257 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 FANCLQ9NW38 375 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 TAB2Q9NYJ8 693 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 GCNT4Q9P109 453 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 PCDHB4Q9Y5E5 795 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 USP34Q70CQ2 3546 aa11.78□□□□□ -0.52
LIG1-211ENST00000596457 CACNA1BQ00975 2339 aa11.77□□□□□ -0.52
LIG1-211ENST00000596457 MYO10Q9HD67 2058 aa11.77□□□□□ -0.52
LIG1-211ENST00000596457 TRIM66O15016 1216 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 PMM2O15305 246 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 MOSPD3O75425 235 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 LETM1O95202 739 aaPredicted RBP11.77□□□□□ -0.53
LIG1-211ENST00000596457 SLC9A1P19634 815 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 CDK11BP21127 795 aaKnown RBP11.77□□□□□ -0.53
LIG1-211ENST00000596457 TBXAS1P24557 533 aaPredicted RBP11.77□□□□□ -0.53
LIG1-211ENST00000596457 MAGEA11P43364 429 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 SIGLEC14Q08ET2 396 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 INCA1Q0VD86 236 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 VWA3BQ502W6 1294 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 ARHGAP15Q53QZ3 475 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 TCP11X2Q5H9J9 407 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 STXBP5Q5T5C0 1151 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 GPR158Q5T848 1215 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 PARM1Q6UWI2 310 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 VSTM1Q6UX27 236 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 GBP6Q6ZN66 633 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 TRIM67Q6ZTA4 783 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 NPAS3Q8IXF0 933 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 LEMD2Q8NC56 503 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 LMO3Q8TAP4 145 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 CYFIP2Q96F07 1278 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 ZSWIM3Q96MP5 696 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 KCNK16Q96T55 309 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 KXD1Q9BQD3 176 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 NAT10Q9H0A0 1025 aaKnown RBP11.77□□□□□ -0.53
LIG1-211ENST00000596457 VPS16Q9H269 839 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 NDST4Q9H3R1 872 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 SMOC2Q9H3U7 446 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 KCNK12Q9HB15 430 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 UBE2TQ9NPD8 197 aaPredicted RBP11.77□□□□□ -0.53
LIG1-211ENST00000596457 KRT82Q9NSB4 513 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 EPS15L1Q9UBC2 864 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 GREB1Q4ZG55 1949 aa11.77□□□□□ -0.53
LIG1-211ENST00000596457 ZNF638Q14966 1978 aaKnown RBP11.77□□□□□ -0.53
LIG1-211ENST00000596457 OBSL1O75147 1896 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 DENND4CQ5VZ89 1909 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 FGF19O95750 216 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 ABL1P00519 1130 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 CALCAP01258 141 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 TPM2P07951 284 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 CD19P15391 556 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 HMGA1P17096 107 aaKnown RBP11.76□□□□□ -0.53
LIG1-211ENST00000596457 CDC25CP30307 473 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 RAD23BP54727 409 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 EPHA5P54756 1037 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 MAP3K7CLP57077 242 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 MYL5Q02045 173 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 APBA1Q02410 837 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 PTPN21Q16825 1174 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 ARHGAP44Q17R89 818 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 EXOC3L4Q17RC7 722 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 SKOR2Q2VWA4 1001 aaPredicted RBP11.76□□□□□ -0.53
LIG1-211ENST00000596457 PPP1R26Q5T8A7 1209 aaPredicted RBP11.76□□□□□ -0.53
LIG1-211ENST00000596457 PHLDB3Q6NSJ2 640 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 GJB7Q6PEY0 223 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 POTEHQ6S545 545 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 TMEM270Q6UE05 265 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 DENND5BQ6ZUT9 1274 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 PAQR9Q6ZVX9 377 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 GAREM2Q75VX8 874 aa11.76□□□□□ -0.53
LIG1-211ENST00000596457 UBALD2Q8IYN6 164 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms