RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 GCNT4Q9P109 453 aa17.06■□□□□ 0.32
LINC02560-201ENST00000596379 MAGEC2Q9UBF1 373 aaPredicted RBP17.06■□□□□ 0.32
LINC02560-201ENST00000596379 WNT6Q9Y6F9 365 aa17.06■□□□□ 0.32
LINC02560-201ENST00000596379 CACNA1BQ00975 2339 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 ACACBO00763 2458 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 PTPRJQ12913 1337 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 C2orf78A6NCI8 922 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 ZNF233A6NK53 670 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 KIAA0391O15091 583 aaKnown RBP17.05■□□□□ 0.32
LINC02560-201ENST00000596379 CENPBP07199 599 aaPredicted RBP17.05■□□□□ 0.32
LINC02560-201ENST00000596379 MAGEA11P43364 429 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 IFNAR2P48551 515 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 SF3A2Q15428 464 aaKnown RBP17.05■□□□□ 0.32
LINC02560-201ENST00000596379 EML3Q32P44 896 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 FBXO43Q4G163 708 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 AASDHQ4L235 1098 aaPredicted RBP17.05■□□□□ 0.32
LINC02560-201ENST00000596379 C4orf50Q6ZRC1 276 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 LIMS2Q7Z4I7 341 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 CBWD2Q8IUF1 395 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 CCDC65Q8IXS2 484 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 FSIP1Q8NA03 581 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 GLIS3Q8NEA6 775 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 RPLP0P6Q8NHW5 317 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 KBTBD7Q8WVZ9 684 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 EZH1Q92800 747 aaPredicted RBP17.05■□□□□ 0.32
LINC02560-201ENST00000596379 CD101Q93033 1021 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 HPS3Q969F9 1004 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 EXOC4Q96A65 974 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 HHIPQ96QV1 700 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 SYT15Q9BQS2 421 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 LINC00597Q9H2U6 94 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 CRTAC1Q9NQ79 661 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 CDH9Q9ULB4 789 aa17.05■□□□□ 0.32
LINC02560-201ENST00000596379 MORC2Q9Y6X9 1032 aaPredicted RBP17.05■□□□□ 0.32
LINC02560-201ENST00000596379 EPN2O95208 641 aa17.04■□□□□ 0.32
LINC02560-201ENST00000596379 TNNC2P02585 160 aa17.04■□□□□ 0.32
LINC02560-201ENST00000596379 PDGFRBP09619 1106 aa17.04■□□□□ 0.32
LINC02560-201ENST00000596379 ZNF806P0C7X5 589 aa17.04■□□□□ 0.32
LINC02560-201ENST00000596379 HDCP19113 662 aa17.04■□□□□ 0.32
LINC02560-201ENST00000596379 PSMC1P62191 440 aaKnown RBP17.04■□□□□ 0.32
LINC02560-201ENST00000596379 USP4Q13107 963 aa17.04■□□□□ 0.32
LINC02560-201ENST00000596379 PSMD2Q13200 908 aa17.04■□□□□ 0.32
LINC02560-201ENST00000596379 SURF1Q15526 300 aa17.04■□□□□ 0.32
LINC02560-201ENST00000596379 DUOXA2Q1HG44 320 aa17.04■□□□□ 0.32
LINC02560-201ENST00000596379 IL31Q6EBC2 164 aa17.04■□□□□ 0.32
LINC02560-201ENST00000596379 C12orf50Q8NA57 414 aaPredicted RBP17.04■□□□□ 0.32
LINC02560-201ENST00000596379 SH3RF2Q8TEC5 729 aa17.04■□□□□ 0.32
LINC02560-201ENST00000596379 ATP2A3Q93084 1043 aa17.04■□□□□ 0.32
LINC02560-201ENST00000596379 MYLPFQ96A32 169 aa17.04■□□□□ 0.32
LINC02560-201ENST00000596379 MTMR6Q9Y217 621 aa17.04■□□□□ 0.32
LINC02560-201ENST00000596379 CNOT1A5YKK6 2376 aaKnown RBP17.04■□□□□ 0.32
LINC02560-201ENST00000596379 MYO16Q9Y6X6 1858 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 AKAP3O75969 853 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 KCNA4P22459 653 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 BDNFP23560 247 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 HOXD13P35453 343 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 GRIK1P39086 918 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 CYP27A1Q02318 531 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 NR1H3Q13133 447 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 KCNB1Q14721 858 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 STXBP4Q6ZWJ1 553 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 SYT13Q7L8C5 426 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 ZC3H10Q96K80 434 aaKnown RBP17.03■□□□□ 0.32
LINC02560-201ENST00000596379 SPATA17Q96L03 361 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 RXFP3Q9NSD7 469 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 HSPBP1Q9NZL4 362 aa17.03■□□□□ 0.32
LINC02560-201ENST00000596379 EPG5Q9HCE0 2579 aa17.02■□□□□ 0.32
LINC02560-201ENST00000596379 PTPRDP23468 1912 aa17.02■□□□□ 0.32
LINC02560-201ENST00000596379 WARSP23381 471 aaKnown RBP17.02■□□□□ 0.32
LINC02560-201ENST00000596379 LIMK1P53667 647 aa17.02■□□□□ 0.32
LINC02560-201ENST00000596379 USP46P62068 366 aa17.02■□□□□ 0.32
LINC02560-201ENST00000596379 STK38Q15208 465 aa17.02■□□□□ 0.32
LINC02560-201ENST00000596379 MAPRE1Q15691 268 aaKnown RBP17.02■□□□□ 0.32
LINC02560-201ENST00000596379 PLK5Q496M5 336 aa17.02■□□□□ 0.32
LINC02560-201ENST00000596379 PLA2G2CQ5R387 149 aa17.02■□□□□ 0.32
LINC02560-201ENST00000596379 VSTM1Q6UX27 236 aa17.02■□□□□ 0.32
LINC02560-201ENST00000596379 RDH13Q8NBN7 331 aa17.02■□□□□ 0.32
LINC02560-201ENST00000596379 DDX1Q92499 740 aaKnown RBP17.02■□□□□ 0.32
LINC02560-201ENST00000596379 MMS19Q96T76 1030 aa17.02■□□□□ 0.32
LINC02560-201ENST00000596379 LRRC27Q9C0I9 530 aa17.02■□□□□ 0.32
LINC02560-201ENST00000596379 SMOC1Q9H4F8 434 aa17.02■□□□□ 0.32
LINC02560-201ENST00000596379 ZSCAN16Q9H4T2 348 aaPredicted RBP17.02■□□□□ 0.32
LINC02560-201ENST00000596379 ARHGAP26Q9UNA1 814 aa17.02■□□□□ 0.32
LINC02560-201ENST00000596379 HELZP42694 1942 aaKnown RBP17.02■□□□□ 0.31
LINC02560-201ENST00000596379 KIAA1549LQ6ZVL6 1849 aa17.01■□□□□ 0.31
LINC02560-201ENST00000596379 DCLK1O15075 740 aa17.01■□□□□ 0.31
LINC02560-201ENST00000596379 KRT37O76014 449 aa17.01■□□□□ 0.31
LINC02560-201ENST00000596379 CST3P01034 146 aaPredicted RBP17.01■□□□□ 0.31
LINC02560-201ENST00000596379 TCF3P15923 654 aa17.01■□□□□ 0.31
LINC02560-201ENST00000596379 ANXA13P27216 316 aa17.01■□□□□ 0.31
LINC02560-201ENST00000596379 GNL1P36915 607 aaPredicted RBP17.01■□□□□ 0.31
LINC02560-201ENST00000596379 NASPP49321 788 aaPredicted RBP17.01■□□□□ 0.31
LINC02560-201ENST00000596379 ZXDBP98169 803 aa17.01■□□□□ 0.31
LINC02560-201ENST00000596379 DMC1Q14565 340 aa17.01■□□□□ 0.31
LINC02560-201ENST00000596379 E2F4Q16254 413 aa17.01■□□□□ 0.31
LINC02560-201ENST00000596379 DENND5BQ6ZUT9 1274 aa17.01■□□□□ 0.31
LINC02560-201ENST00000596379 TRAPPC11Q7Z392 1133 aa17.01■□□□□ 0.31
LINC02560-201ENST00000596379 WDR49Q8IV35 697 aa17.01■□□□□ 0.31
LINC02560-201ENST00000596379 MYCBPAPQ8TBZ2 947 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms