RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 SYNPOQ8N3V7 929 aa19.16■□□□□ 0.66
HOMER3-208ENST00000595756 STKLD1Q8NE28 680 aa19.16■□□□□ 0.66
HOMER3-208ENST00000595756 SCFD1Q8WVM8 642 aa19.16■□□□□ 0.66
HOMER3-208ENST00000595756 USP13Q92995 863 aaPredicted RBP19.16■□□□□ 0.66
HOMER3-208ENST00000595756 CEP295NLQ96MC4 621 aa19.16■□□□□ 0.66
HOMER3-208ENST00000595756 CGRRF1Q99675 332 aa19.16■□□□□ 0.66
HOMER3-208ENST00000595756 FAM83CQ9BQN1 747 aa19.16■□□□□ 0.66
HOMER3-208ENST00000595756 SYT15Q9BQS2 421 aa19.16■□□□□ 0.66
HOMER3-208ENST00000595756 TDP1Q9NUW8 608 aa19.16■□□□□ 0.66
HOMER3-208ENST00000595756 CGNQ9P2M7 1197 aaKnown RBP19.16■□□□□ 0.66
HOMER3-208ENST00000595756 CDH9Q9ULB4 789 aa19.16■□□□□ 0.66
HOMER3-208ENST00000595756 CCL26Q9Y258 94 aa19.16■□□□□ 0.66
HOMER3-208ENST00000595756 HCRTO43612 131 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 WARSP23381 471 aaKnown RBP19.15■□□□□ 0.66
HOMER3-208ENST00000595756 CXCL12P48061 93 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 CYP24A1Q07973 514 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 PSMD6Q15008 389 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 PON2Q15165 354 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 MAPRE1Q15691 268 aaKnown RBP19.15■□□□□ 0.66
HOMER3-208ENST00000595756 SDHAF4Q5VUM1 108 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 TXNDC8Q6A555 127 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 TRAPPC11Q7Z392 1133 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 C12orf56Q8IXR9 622 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 DCLK2Q8N568 766 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 XXYLT1Q8NBI6 393 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 TTC8Q8TAM2 541 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 SECISBP2LQ93073 1101 aaKnown RBP19.15■□□□□ 0.66
HOMER3-208ENST00000595756 MYLPFQ96A32 169 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 FNBP1Q96RU3 617 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 BLZF1Q9H2G9 400 aa19.15■□□□□ 0.66
HOMER3-208ENST00000595756 RBM12Q9NTZ6 932 aaKnown RBP19.15■□□□□ 0.66
HOMER3-208ENST00000595756 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.14■□□□□ 0.65
HOMER3-208ENST00000595756 GADD45BO75293 160 aaPredicted RBP19.14■□□□□ 0.65
HOMER3-208ENST00000595756 DLATP10515 647 aaKnown RBP19.14■□□□□ 0.65
HOMER3-208ENST00000595756 VSTM1Q6UX27 236 aa19.14■□□□□ 0.65
HOMER3-208ENST00000595756 Q6ZS52 159 aa19.14■□□□□ 0.65
HOMER3-208ENST00000595756 NELFCDQ8IXH7 590 aa19.14■□□□□ 0.65
HOMER3-208ENST00000595756 GPR161Q8N6U8 529 aaKnown RBP19.14■□□□□ 0.65
HOMER3-208ENST00000595756 HPS4Q9NQG7 708 aa19.14■□□□□ 0.65
HOMER3-208ENST00000595756 KIAA1549LQ6ZVL6 1849 aa19.14■□□□□ 0.65
HOMER3-208ENST00000595756 STAU1O95793 577 aaKnown RBP19.13■□□□□ 0.65
HOMER3-208ENST00000595756 TNNI1P19237 187 aa19.13■□□□□ 0.65
HOMER3-208ENST00000595756 CASP1P29466 404 aa19.13■□□□□ 0.65
HOMER3-208ENST00000595756 CYP2J2P51589 502 aa19.13■□□□□ 0.65
HOMER3-208ENST00000595756 PSMC1P62191 440 aaKnown RBP19.13■□□□□ 0.65
HOMER3-208ENST00000595756 USP4Q13107 963 aa19.13■□□□□ 0.65
HOMER3-208ENST00000595756 RUNX3Q13761 415 aa19.13■□□□□ 0.65
HOMER3-208ENST00000595756 GRAMD1CQ8IYS0 662 aa19.13■□□□□ 0.65
HOMER3-208ENST00000595756 RIN3Q8TB24 985 aa19.13■□□□□ 0.65
HOMER3-208ENST00000595756 RMDN1Q96DB5 314 aa19.13■□□□□ 0.65
HOMER3-208ENST00000595756 SPATA17Q96L03 361 aa19.13■□□□□ 0.65
HOMER3-208ENST00000595756 CRTAC1Q9NQ79 661 aa19.13■□□□□ 0.65
HOMER3-208ENST00000595756 GKN1Q9NS71 199 aa19.13■□□□□ 0.65
HOMER3-208ENST00000595756 EXOC1Q9NV70 894 aa19.13■□□□□ 0.65
HOMER3-208ENST00000595756 K7ESF4 209 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 CLIC2O15247 247 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 TACC1O75410 805 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 SMC2O95347 1197 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 RPN1P04843 607 aaKnown RBP19.12■□□□□ 0.65
HOMER3-208ENST00000595756 FAM163BP0C2L3 166 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 LMO2P25791 158 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 DPYDQ12882 1025 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 PDGFRLQ15198 375 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 ZNF77Q15935 545 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 CC2D1AQ6P1N0 951 aaPredicted RBP19.12■□□□□ 0.65
HOMER3-208ENST00000595756 SCN4BQ8IWT1 228 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 RDH13Q8NBN7 331 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 GOLGA5Q8TBA6 731 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 MMS19Q96T76 1030 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 GTPBP4Q9BZE4 634 aaKnown RBP19.12■□□□□ 0.65
HOMER3-208ENST00000595756 GZF1Q9H116 711 aaPredicted RBP19.12■□□□□ 0.65
HOMER3-208ENST00000595756 SLC39A2Q9NP94 309 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 MAGEC2Q9UBF1 373 aaPredicted RBP19.12■□□□□ 0.65
HOMER3-208ENST00000595756 GMEB2Q9UKD1 530 aa19.12■□□□□ 0.65
HOMER3-208ENST00000595756 MYO16Q9Y6X6 1858 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 TRAV19A0A0A6YYK7 116 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 TRIM66O15016 1216 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 KLRC4O43908 158 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 ATP2C2O75185 946 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 KIF20AO95235 890 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 USP17L7P0C7H9 530 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 TNNC1P63316 161 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 AMPD2Q01433 879 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 KCNB1Q14721 858 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 MTF1Q14872 753 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 KNOP1Q1ED39 458 aaKnown RBP19.11■□□□□ 0.65
HOMER3-208ENST00000595756 TMEM196Q5HYL7 178 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 TRIM68Q6AZZ1 485 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 MYCBPAPQ8TBZ2 947 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 CCDC127Q96BQ5 260 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 CHFRQ96EP1 664 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 EBF3Q9H4W6 596 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 TRPC7Q9HCX4 862 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 RMND1Q9NWS8 449 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 RAB23Q9ULC3 237 aa19.11■□□□□ 0.65
HOMER3-208ENST00000595756 TRDMT1O14717 391 aaKnown RBP19.1■□□□□ 0.65
HOMER3-208ENST00000595756 CST3P01034 146 aaPredicted RBP19.1■□□□□ 0.65
HOMER3-208ENST00000595756 CKMP06732 381 aa19.1■□□□□ 0.65
HOMER3-208ENST00000595756 TCF3P15923 654 aa19.1■□□□□ 0.65
HOMER3-208ENST00000595756 PFKLP17858 780 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms