RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 HOMER2Q9NSB8 354 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 CNTN3Q9P232 1028 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 SLC9A2Q9UBY0 812 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 CTDP1Q9Y5B0 961 aaPredicted RBP13.87□□□□□ -0.19
VRK3-209ENST00000594948 ANK1P16157 1881 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 DOCK1Q14185 1865 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 DPPA5A6NC42 116 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 K7ERI5 159 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 GYG2O15488 501 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 PSMG1O95456 288 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 SKIP12755 728 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 POLR2BP30876 1174 aaKnown RBP13.87□□□□□ -0.19
VRK3-209ENST00000594948 RAP1GDS1P52306 607 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 EFTUD2Q15029 972 aaKnown RBP eCLIP13.87□□□□□ -0.193e-6■■□□□ 13.2
VRK3-209ENST00000594948 MSS51Q4VC12 460 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 KHDC1Q4VXA5 237 aaKnown RBP13.87□□□□□ -0.19
VRK3-209ENST00000594948 TXNRD3NBQ6F5E7 133 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 CCDC62Q6P9F0 684 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 SH2D5Q6ZV89 423 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 CCDC60Q8IWA6 550 aaPredicted RBP13.87□□□□□ -0.19
VRK3-209ENST00000594948 BRSK2Q8IWQ3 736 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 DEPTORQ8TB45 409 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 SLC44A1Q8WWI5 657 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 RSAD2Q8WXG1 361 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 HAUS1Q96CS2 278 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 TMEM120AQ9BXJ8 343 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 FRMD8Q9BZ67 464 aaPredicted RBP13.87□□□□□ -0.19
VRK3-209ENST00000594948 NMRK1Q9NWW6 199 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 SLC17A7Q9P2U7 560 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 STX18Q9P2W9 335 aaKnown RBP13.87□□□□□ -0.19
VRK3-209ENST00000594948 ZNF212Q9UDV6 495 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 DCTN4Q9UJW0 460 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 AGTPBP1Q9UPW5 1226 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 NUMBLQ9Y6R0 609 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 H0Y3Z8 333 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 MAGEC1O60732 1142 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 DLDP09622 509 aaKnown RBP13.86□□□□□ -0.19
VRK3-209ENST00000594948 WEE2P0C1S8 567 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 SUPT20HL2P0C7V6 817 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 NEFHP12036 1026 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 KDELR1P24390 212 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 SSTR3P32745 418 aaPredicted RBP13.86□□□□□ -0.19
VRK3-209ENST00000594948 ARL2P36404 184 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 ACTR2P61160 394 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 TGFB2P61812 414 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 ACAP1Q15027 740 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 SURF1Q15526 300 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 NBPF20Q3BBV1 942 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 SUPT20HL1Q3ZLR7 823 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 RFWD3Q6PCD5 774 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 DSTYKQ6XUX3 929 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 OR5B17Q8NGF7 314 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 SH3GL3Q99963 347 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 NIF3L1Q9GZT8 377 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 DHX33Q9H6R0 707 aaKnown RBP13.86□□□□□ -0.19
VRK3-209ENST00000594948 MKS1Q9NXB0 559 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 WDR35Q9P2L0 1181 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 XPO7Q9UIA9 1087 aaKnown RBP13.86□□□□□ -0.19
VRK3-209ENST00000594948 ASB3Q9Y575 518 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 LCTP09848 1927 aa13.86□□□□□ -0.19
VRK3-209ENST00000594948 A0A0G2JND7 137 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 CFAP69A5D8W1 941 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 F8W8V4 182 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 GOLGA8SH3BPF8 625 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 GOLGA8MH3BSY2 632 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 APOC4-APOC2K7ER74 178 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 CST8O60676 142 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 BANF1O75531 89 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 TMEM63AO94886 807 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 APOC2P02655 101 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 GSTA2P09210 222 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 ESRRAP11474 423 aaPredicted RBP13.85□□□□□ -0.19
VRK3-209ENST00000594948 YWHAEP62258 255 aaKnown RBP13.85□□□□□ -0.19
VRK3-209ENST00000594948 ZBTB16Q05516 673 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 AP1B1Q10567 949 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 PTK7Q13308 1070 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 RCN1Q15293 331 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 ACSBG2Q5FVE4 666 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 SNX30Q5VWJ9 437 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 ZPBP2Q6X784 338 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 CDAN1Q8IWY9 1227 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 VPS52Q8N1B4 723 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 WDTC1Q8N5D0 677 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 PPFIBP2Q8ND30 876 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 PTPRN2Q92932 1015 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 MCUR1Q96AQ8 359 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 MRRFQ96E11 262 aaKnown RBP13.85□□□□□ -0.19
VRK3-209ENST00000594948 OXNAD1Q96HP4 312 aaPredicted RBP13.85□□□□□ -0.19
VRK3-209ENST00000594948 LHX5Q9H2C1 402 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 RNF146Q9NTX7 359 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 KCNK4Q9NYG8 393 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 IKBKGQ9Y6K9 419 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 WDR91A4D1P6 747 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 PLSCR1O15162 318 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 RARBP10826 455 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 BRD2P25440 801 aaKnown RBP13.85□□□□□ -0.19
VRK3-209ENST00000594948 PSMA2P25787 234 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 SERPINB3P29508 390 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 OAZ1P54368 228 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 GDF10P55107 478 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms