RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 MDH1BQ5I0G3 518 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 ZNF852Q6ZMS4 543 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 CELF5Q8N6W0 485 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 DTWD2Q8NBA8 298 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 B3GALNT2Q8NCR0 500 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 CSGALNACT1Q8TDX6 532 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 FAXDC2Q96IV6 333 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 C8orf48Q96LL4 319 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 TMEM8AQ9HCN3 771 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 THG1LQ9NWX6 298 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 PTPRDP23468 1912 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 MIA3Q5JRA6 1907 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 HCRTO43612 131 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 HLA-DRAP01903 254 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 F11P03951 625 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 PFKLP17858 780 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 BDNFP23560 247 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 PRCPP42785 496 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 PPP3CCP48454 512 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 GPR15P49685 360 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 STXBP5Q5T5C0 1151 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 TPRG1Q6ZUI0 275 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 DENND5BQ6ZUT9 1274 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 MON1AQ86VX9 555 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 UNC93AQ86WB7 457 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 SMYD4Q8IYR2 804 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 CMTM8Q8IZV2 173 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 TTC39CQ8N584 583 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 BCO2Q9BYV7 579 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 SMYD3Q9H7B4 428 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 OBSL1O75147 1896 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 DENND4CQ5VZ89 1909 aa18.9■□□□□ 0.62
SHKBP1-204ENST00000594862 ZFHX2Q9C0A1 2572 aaPredicted RBP18.89■□□□□ 0.62
SHKBP1-204ENST00000594862 COL4A2P08572 1712 aa18.89■□□□□ 0.61
SHKBP1-204ENST00000594862 DMDP11532 3685 aa18.89■□□□□ 0.61
SHKBP1-204ENST00000594862 PI15O43692 258 aa18.89■□□□□ 0.61
SHKBP1-204ENST00000594862 CDR1P51861 262 aa18.89■□□□□ 0.61
SHKBP1-204ENST00000594862 NOP14P78316 857 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-204ENST00000594862 ZNF268Q14587 947 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-204ENST00000594862 C1orf220Q5T0J3 134 aa18.89■□□□□ 0.61
SHKBP1-204ENST00000594862 KRT39Q6A163 491 aa18.89■□□□□ 0.61
SHKBP1-204ENST00000594862 ADSSL1Q8N142 457 aa18.89■□□□□ 0.61
SHKBP1-204ENST00000594862 BPIFB1Q8TDL5 484 aa18.89■□□□□ 0.61
SHKBP1-204ENST00000594862 DHTKD1Q96HY7 919 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-204ENST00000594862 FAM124BQ9H5Z6 455 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-204ENST00000594862 CYP3A43Q9HB55 503 aa18.89■□□□□ 0.61
SHKBP1-204ENST00000594862 LTB4R2Q9NPC1 389 aa18.89■□□□□ 0.61
SHKBP1-204ENST00000594862 TRIM49P0CI25 452 aa18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 TRIM49CP0CI26 452 aa18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 GCLMP48507 274 aa18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 MXI1P50539 228 aa18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 UBXN2BQ14CS0 331 aa18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 CCDC142Q17RM4 750 aa18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 SDHAF4Q5VUM1 108 aa18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 FOXR2Q6PJQ5 311 aa18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 SCARA5Q6ZMJ2 495 aa18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 TMEM150AQ86TG1 271 aa18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 ZC3H3Q8IXZ2 948 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 ATOH1Q92858 354 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 IER2Q9BTL4 223 aa18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 SLC46A2Q9BY10 475 aa18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 NIF3L1Q9GZT8 377 aa18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 C8orf33Q9H7E9 229 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 HEBP1Q9NRV9 189 aa18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 PTPRZ1P23471 2315 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-204ENST00000594862 TRAV19A0A0A6YYK7 116 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 PRAMEF12O95522 483 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 USP17L7P0C7H9 530 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 ASPAP45381 313 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 UBE2HP62256 183 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 PPP3CAQ08209 521 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 TICRRQ7Z2Z1 1910 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 MAB21L3Q8N8X9 362 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 RSPRY1Q96DX4 576 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 SMARCD1Q96GM5 515 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 SLITRK1Q96PX8 696 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 TTLL2Q9BWV7 592 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 FOXQ1Q9C009 403 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 DPEP3Q9H4B8 488 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 METTL14Q9HCE5 456 aaKnown RBP18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 TDP1Q9NUW8 608 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 PIAS3Q9Y6X2 628 aa18.87■□□□□ 0.61
SHKBP1-204ENST00000594862 KIF26AQ9ULI4 1882 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 VPS13AQ96RL7 3174 aa18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 BICDL2A1A5D9 508 aa18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 FAM170BA6NMN3 283 aa18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 F8VP50 259 aa18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 ARNTLO00327 626 aa18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 RTN3O95197 1032 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 CCNE1P24864 410 aa18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 RPS9P46781 194 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 RAP1GAPP47736 663 aa18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 CDH8P55286 799 aa18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 INCA1Q0VD86 236 aa18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 ANGPT1Q15389 498 aa18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 FBXL13Q8NEE6 735 aa18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 PDZD8Q8NEN9 1154 aa18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 TAS1R2Q8TE23 839 aa18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 CEP63Q96MT8 703 aa18.86■□□□□ 0.61
SHKBP1-204ENST00000594862 MED10Q9BTT4 135 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms