RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 KNL1Q8NG31 2342 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 ADAMTS20P59510 1910 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 PLXNB3Q9ULL4 1909 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 TRAV19A0A0A6YYK7 116 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 K7EQS6 105 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 CDX4O14627 284 aaPredicted RBP13.16□□□□□ -0.3
SIN3B-204ENST00000594372 RHOBTB1O94844 696 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 CD2BP2O95400 341 aaKnown RBP13.16□□□□□ -0.3
SIN3B-204ENST00000594372 CSH1P0DML2 217 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 CSH2P0DML3 217 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 DDX6P26196 483 aaKnown RBP eCLIP13.16□□□□□ -0.3
SIN3B-204ENST00000594372 DDIT3P35638 169 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 OPRD1P41143 372 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 UBA7P41226 1012 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 USP46P62068 366 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 FAM160A1Q05DH4 1040 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 GAB4Q2WGN9 574 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 RILPL1Q5EBL4 403 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 INTS6LQ5JSJ4 861 aaKnown RBP13.16□□□□□ -0.3
SIN3B-204ENST00000594372 PMS2CLQ68D20 193 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 TMEM92Q6UXU6 159 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 CYP2U1Q7Z449 544 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 DEFB119Q8N690 84 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 C1orf127Q8N9H9 656 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 MDGA1Q8NFP4 955 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 USP33Q8TEY7 942 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 C2orf15Q8WU43 125 aaKnown RBP13.16□□□□□ -0.3
SIN3B-204ENST00000594372 CALML4Q96GE6 196 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 TMEM121BQ9BXQ6 578 aaPredicted RBP13.16□□□□□ -0.3
SIN3B-204ENST00000594372 FGFBP2Q9BYJ0 223 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 ASB7Q9H672 318 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 SMPD4Q9NXE4 827 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 GCNT4Q9P109 453 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 KCNG1Q9UIX4 513 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 WASF3Q9UPY6 502 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 PCDH15Q96QU1 1955 aa13.16□□□□□ -0.3
SIN3B-204ENST00000594372 GOLGA4Q13439 2230 aaKnown RBP13.15□□□□□ -0.3
SIN3B-204ENST00000594372 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 HYAL3O43820 417 aaPredicted RBP13.15□□□□□ -0.3
SIN3B-204ENST00000594372 NEFLP07196 543 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 KRT19P08727 400 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 USP17L7P0C7H9 530 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 GJB2P29033 226 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 CASP5P51878 434 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 KDSRQ06136 332 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 ZNF268Q14587 947 aaPredicted RBP13.15□□□□□ -0.3
SIN3B-204ENST00000594372 EMC10Q5UCC4 262 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 C12orf40Q86WS4 652 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 TMEFF1Q8IYR6 380 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 ALLCQ8N6M5 410 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 ATP2A3Q93084 1043 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 ZNF560Q96MR9 790 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 SCNM1Q9BWG6 230 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 ADAM33Q9BZ11 813 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 CCSER1Q9C0I3 900 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 PCIF1Q9H4Z3 704 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 TMEM9BQ9NQ34 198 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 SNX9Q9Y5X1 595 aa13.15□□□□□ -0.3
SIN3B-204ENST00000594372 PTPRJQ12913 1337 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 PTPRBP23467 1997 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 SPAARA0A1B0GVQ0 90 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 H3BQV1 296 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 KHNYNO15037 678 aaKnown RBP13.14□□□□□ -0.31
SIN3B-204ENST00000594372 LMO2P25791 158 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 TIE1P35590 1138 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 PTGER3P43115 390 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 DAB2IPQ5VWQ8 1189 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 SPATA2LQ8IUW3 424 aaPredicted RBP13.14□□□□□ -0.31
SIN3B-204ENST00000594372 CSGALNACT2Q8N6G5 542 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 OR2I1PQ8NGU4 316 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 CXorf38Q8TB03 319 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 KCNN1Q92952 543 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 MYLPFQ96A32 169 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 ACDQ96AP0 544 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 EPSTI1Q96J88 318 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 TSPAN18Q96SJ8 248 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 MTMR12Q9C0I1 747 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 PDE11AQ9HCR9 933 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 TMEM74BQ9NUR3 256 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 EBF1Q9UH73 591 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 MBD1Q9UIS9 605 aaPredicted RBP13.14□□□□□ -0.31
SIN3B-204ENST00000594372 SIX4Q9UIU6 781 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.14□□□□□ -0.31
SIN3B-204ENST00000594372 STYXL1Q9Y6J8 313 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 ACACAQ13085 2346 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 CELSR3Q9NYQ7 3312 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 ITPR1Q14643 2758 aa13.14□□□□□ -0.31
SIN3B-204ENST00000594372 SGK1O00141 431 aa13.13□□□□□ -0.31
SIN3B-204ENST00000594372 LEFTY2O00292 366 aa13.13□□□□□ -0.31
SIN3B-204ENST00000594372 HUS1O60921 280 aa13.13□□□□□ -0.31
SIN3B-204ENST00000594372 KLF8O95600 359 aaPredicted RBP13.13□□□□□ -0.31
SIN3B-204ENST00000594372 CYP17A1P05093 508 aa13.13□□□□□ -0.31
SIN3B-204ENST00000594372 PDGFRBP09619 1106 aa13.13□□□□□ -0.31
SIN3B-204ENST00000594372 HDCP19113 662 aa13.13□□□□□ -0.31
SIN3B-204ENST00000594372 BDNFP23560 247 aa13.13□□□□□ -0.31
SIN3B-204ENST00000594372 RPL10AP62906 217 aaKnown RBP13.13□□□□□ -0.31
SIN3B-204ENST00000594372 AMPD2Q01433 879 aa13.13□□□□□ -0.31
SIN3B-204ENST00000594372 IFRD2Q12894 506 aaPredicted RBP13.13□□□□□ -0.31
SIN3B-204ENST00000594372 KCNB1Q14721 858 aa13.13□□□□□ -0.31
SIN3B-204ENST00000594372 NFE2Q16621 373 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms