RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 TFIP11Q9UBB9 837 aaKnown RBP15.81■□□□□ 0.12
PNKP-202ENST00000593706 GTF3C4Q9UKN8 822 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 TNRC6BQ9UPQ9 1833 aaKnown RBP15.81■□□□□ 0.12
PNKP-202ENST00000593706 PLXND1Q9Y4D7 1925 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 SNX9Q9Y5X1 595 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 GOLGA8IPA6NC78 632 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 GOLGA8JA6NMD2 632 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 AKAP3O75969 853 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 NOL4O94818 638 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 ZNF806P0C7X5 589 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 PCSK1P29120 753 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 GJA4P35212 333 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 RAP1GAPP47736 663 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 FAM160A1Q05DH4 1040 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 PSMD2Q13200 908 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 ALCAMQ13740 583 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 KCNB1Q14721 858 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 STK38Q15208 465 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 ST3GAL2Q16842 350 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 FOXD4L5Q5VV16 416 aaPredicted RBP15.8■□□□□ 0.12
PNKP-202ENST00000593706 SHC4Q6S5L8 630 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 CCDC73Q6ZRK6 1079 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 SCN4BQ8IWT1 228 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 FSIP1Q8NA03 581 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 FOXD4L4Q8WXT5 416 aaPredicted RBP15.8■□□□□ 0.12
PNKP-202ENST00000593706 ACDQ96AP0 544 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 FAM84AQ96KN4 292 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 TMEM206Q9H813 350 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 OLFML3Q9NRN5 406 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 PCDHB13Q9Y5F0 798 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 WNT6Q9Y6F9 365 aa15.8■□□□□ 0.12
PNKP-202ENST00000593706 HSP90AA1P07900 732 aaKnown RBP15.79■□□□□ 0.12
PNKP-202ENST00000593706 GARTP22102 1010 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 MPLP40238 635 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 STAT6P42226 847 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 LHX1P48742 406 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 GALK1P51570 392 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 CASP5P51878 434 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 LIMK1P53667 647 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 USP4Q13107 963 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 ELF2Q15723 593 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 ZNF77Q15935 545 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 CCDC142Q17RM4 750 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 CFAP221Q4G0U5 840 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 FBXO43Q4G163 708 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 NAIF1Q69YI7 327 aaPredicted RBP15.79■□□□□ 0.12
PNKP-202ENST00000593706 TOP6BLQ8N6T0 577 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 SPATA18Q8TC71 538 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 OSCP1Q8WVF1 389 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 CD101Q93033 1021 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 MYRFLQ96LU7 910 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 SMOC1Q9H4F8 434 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 PCIF1Q9H4Z3 704 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 ECT2Q9H8V3 914 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 FBRSL1Q9HCM7 1045 aaKnown RBP15.79■□□□□ 0.12
PNKP-202ENST00000593706 PDE11AQ9HCR9 933 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 POLR3BQ9NW08 1133 aaPredicted RBP15.79■□□□□ 0.12
PNKP-202ENST00000593706 ZDHHC9Q9Y397 364 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 PCDHGA5Q9Y5G8 931 aa15.79■□□□□ 0.12
PNKP-202ENST00000593706 HCRTO43612 131 aa15.78■□□□□ 0.12
PNKP-202ENST00000593706 APBB3O95704 486 aa15.78■□□□□ 0.12
PNKP-202ENST00000593706 RBP5P82980 135 aa15.78■□□□□ 0.12
PNKP-202ENST00000593706 MYO1EQ12965 1108 aa15.78■□□□□ 0.12
PNKP-202ENST00000593706 C4orf50Q6ZRC1 276 aa15.78■□□□□ 0.12
PNKP-202ENST00000593706 SYT13Q7L8C5 426 aa15.78■□□□□ 0.12
PNKP-202ENST00000593706 OSTM1Q86WC4 334 aa15.78■□□□□ 0.12
PNKP-202ENST00000593706 FUBP3Q96I24 572 aaKnown RBP eCLIP15.78■□□□□ 0.12
PNKP-202ENST00000593706 ANKRD36BP1Q96IX9 119 aa15.78■□□□□ 0.12
PNKP-202ENST00000593706 SLC22A12Q96S37 553 aa15.78■□□□□ 0.12
PNKP-202ENST00000593706 CYP2S1Q96SQ9 504 aa15.78■□□□□ 0.12
PNKP-202ENST00000593706 PKMYT1Q99640 499 aa15.78■□□□□ 0.12
PNKP-202ENST00000593706 CBWD1Q9BRT8 395 aa15.78■□□□□ 0.12
PNKP-202ENST00000593706 RXFP3Q9NSD7 469 aa15.78■□□□□ 0.12
PNKP-202ENST00000593706 GDAP2Q9NXN4 497 aa15.78■□□□□ 0.12
PNKP-202ENST00000593706 ADAMTS9Q9P2N4 1935 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 CUTAO60888 179 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 TNNC2P02585 160 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 PDE6CP51160 858 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 PSMC1P62191 440 aaKnown RBP15.77■□□□□ 0.12
PNKP-202ENST00000593706 NR1H3Q13133 447 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 DMC1Q14565 340 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 PLK5Q496M5 336 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 STPG1Q5TH74 334 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 LMBRD2Q68DH5 695 aaPredicted RBP15.77■□□□□ 0.12
PNKP-202ENST00000593706 ATL3Q6DD88 541 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 GPD1LQ8N335 351 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 ARL14EPQ8N8R7 260 aaPredicted RBP15.77■□□□□ 0.12
PNKP-202ENST00000593706 SPRYD3Q8NCJ5 442 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 SH3RF2Q8TEC5 729 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 ZC3H10Q96K80 434 aaKnown RBP15.77■□□□□ 0.12
PNKP-202ENST00000593706 SYT15Q9BQS2 421 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 FGFBP2Q9BYJ0 223 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 PANK2Q9BZ23 570 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 VPS45Q9NRW7 570 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 PANK4Q9NVE7 773 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 KBTBD4Q9NVX7 518 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 SIX4Q9UIU6 781 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 ANGPTL2Q9UKU9 493 aa15.77■□□□□ 0.12
PNKP-202ENST00000593706 C2orf78A6NCI8 922 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 RHOBTB1O94844 696 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms