RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 SOBPA7XYQ1 873 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 TM4SF5O14894 197 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 AXIN1O15169 862 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 TGFB1I1O43294 461 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 HUS1O60921 280 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 KRT19P08727 400 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 SDHBP21912 280 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 MAGEA11P43364 429 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 NASPP49321 788 aaPredicted RBP11.43□□□□□ -0.58
USE1-203ENST00000593597 RBP5P82980 135 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 MYL7Q01449 175 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 FAM160A1Q05DH4 1040 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 MESP2Q0VG99 397 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 TAF12Q16514 161 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 PPM1JQ5JR12 505 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 PLA2G2CQ5R387 149 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 CCDC73Q6ZRK6 1079 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 EPM2AIP1Q7L775 607 aaPredicted RBP11.43□□□□□ -0.58
USE1-203ENST00000593597 SFTPA1Q8IWL2 248 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 TMEM86AQ8N2M4 240 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 NOC3LQ8WTT2 800 aaKnown RBP11.43□□□□□ -0.58
USE1-203ENST00000593597 OSCP1Q8WVF1 389 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 SYT15Q9BQS2 421 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 ARRDC1-AS1Q9H2J1 176 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 LINC00597Q9H2U6 94 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 TRPC7Q9HCX4 862 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 FOXD4L1Q9NU39 408 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 ZMYM5Q9UJ78 669 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 PCDHB13Q9Y5F0 798 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 MYO18AQ92614 2054 aaKnown RBP11.43□□□□□ -0.58
USE1-203ENST00000593597 MYH10P35580 1976 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 CCDC163A0A0D9SF12 145 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 TULP1O00294 542 aaPredicted RBP11.42□□□□□ -0.58
USE1-203ENST00000593597 DCLK1O15075 740 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 RPP40O75818 363 aaKnown RBP11.42□□□□□ -0.58
USE1-203ENST00000593597 LDHAP00338 332 aaKnown RBP11.42□□□□□ -0.58
USE1-203ENST00000593597 CST3P01034 146 aaPredicted RBP11.42□□□□□ -0.58
USE1-203ENST00000593597 TMEM191BP0C7N4 346 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 TCF3P15923 654 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 CASP1P29466 404 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 OPRD1P41143 372 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 RPL10AP62906 217 aaKnown RBP11.42□□□□□ -0.58
USE1-203ENST00000593597 EHHADHQ08426 723 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 GRSF1Q12849 480 aaKnown RBP eCLIP11.42□□□□□ -0.58
USE1-203ENST00000593597 ALCAMQ13740 583 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 PDGFRLQ15198 375 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 TCEAL6Q6IPX3 200 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 CEP68Q76N32 757 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 SCN4BQ8IWT1 228 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 SYCP3Q8IZU3 236 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 LINC00301Q8NCQ3 95 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 RPLP0P6Q8NHW5 317 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 SPATA18Q8TC71 538 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 PLEKHO2Q8TD55 490 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 SH3RF2Q8TEC5 729 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 CACTINQ8WUQ7 758 aaKnown RBP11.42□□□□□ -0.58
USE1-203ENST00000593597 TCEAL3Q969E4 200 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 FUBP3Q96I24 572 aaKnown RBP eCLIP11.42□□□□□ -0.58
USE1-203ENST00000593597 HPDLQ96IR7 371 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 P2RY13Q9BPV8 354 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 MRPL45Q9BRJ2 306 aaKnown RBP11.42□□□□□ -0.58
USE1-203ENST00000593597 TRIM9Q9C026 710 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 DUSP15Q9H1R2 295 aaPredicted RBP11.42□□□□□ -0.58
USE1-203ENST00000593597 DPEP3Q9H4B8 488 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 TMEM206Q9H813 350 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 KBTBD4Q9NVX7 518 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 DUS2Q9NX74 493 aaKnown RBP11.42□□□□□ -0.58
USE1-203ENST00000593597 HSPBP1Q9NZL4 362 aa11.42□□□□□ -0.58
USE1-203ENST00000593597 TRAV19A0A0A6YYK7 116 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 CKMP06732 381 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 PDGFRBP09619 1106 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 USP17L7P0C7H9 530 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 HNRNPLP14866 589 aaKnown RBP eCLIP11.41□□□□□ -0.58
USE1-203ENST00000593597 PDCP20941 246 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 DRD1P21728 446 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 WARSP23381 471 aaKnown RBP11.41□□□□□ -0.58
USE1-203ENST00000593597 BDNFP23560 247 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 TXLNAP40222 546 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 LHX1P48742 406 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 PLK5Q496M5 336 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 SHC4Q6S5L8 630 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 SPATA2LQ8IUW3 424 aaPredicted RBP11.41□□□□□ -0.58
USE1-203ENST00000593597 TTC16Q8NEE8 873 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 ZNF516Q92618 1163 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 CD101Q93033 1021 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 PCED1BQ96HM7 432 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 ZC3H10Q96K80 434 aaKnown RBP11.41□□□□□ -0.58
USE1-203ENST00000593597 TTLL2Q9BWV7 592 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 RNF38Q9H0F5 515 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 TNMDQ9H2S6 317 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 UPF2Q9HAU5 1272 aaKnown RBP11.41□□□□□ -0.58
USE1-203ENST00000593597 AGPAT3Q9NRZ7 376 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 UXTQ9UBK9 157 aaPredicted RBP11.41□□□□□ -0.58
USE1-203ENST00000593597 CDH9Q9ULB4 789 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 ARHGAP26Q9UNA1 814 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 ADAMTS9Q9P2N4 1935 aa11.41□□□□□ -0.58
USE1-203ENST00000593597 SPEGQ15772 3267 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 K7EQS6 105 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 SCAMP3O14828 347 aaKnown RBP11.4□□□□□ -0.58
USE1-203ENST00000593597 OLFM2O95897 454 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms