RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ZNF592Q92610 1267 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 RABGGTAQ92696 567 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 TOP1MTQ969P6 601 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 PABPC5Q96DU9 382 aaKnown RBP14.26□□□□□ -0.13
VMP1-217ENST00000593168 SUSD3Q96L08 255 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 SAMD11Q96NU1 681 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 TMEM175Q9BSA9 504 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 NRDE2Q9H7Z3 1164 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 PCDHGC5Q9Y5F6 944 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 C19orf67A6NJJ6 358 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 BUB1O43683 1085 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 B4GALT3O60512 393 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 DGKIO75912 1065 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 MTA2O94776 668 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 MICAL2O94851 1124 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 ALDH2P05091 517 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 PDGFRBP09619 1106 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 MMP8P22894 467 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 GATMP50440 423 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 PTP4A2Q12974 167 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 DENND1BQ6P3S1 775 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 MON1BQ7L1V2 547 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 PASD1Q8IV76 773 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 ZNF653Q96CK0 615 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 ARHGEF26Q96DR7 871 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 YME1L1Q96TA2 773 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 COLEC11Q9BWP8 271 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 DDX43Q9NXZ2 648 aaKnown RBP14.25□□□□□ -0.13
VMP1-217ENST00000593168 ADAM22Q9P0K1 906 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 UVRAGQ9P2Y5 699 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 CNOT8Q9UFF9 292 aaKnown RBP14.25□□□□□ -0.13
VMP1-217ENST00000593168 TSPAN16Q9UKR8 245 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 PCDHB8Q9UN66 801 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 CAPN6Q9Y6Q1 641 aa14.25□□□□□ -0.13
VMP1-217ENST00000593168 MYH10P35580 1976 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 CTAGE9A4FU28 777 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 TBKBP1A7MCY6 615 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 NRP1O14786 923 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 FANCGO15287 622 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 TRAPPC3O43617 180 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 KIF4AO95239 1232 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 CALB1P05937 261 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 SETSIPP0DME0 302 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 PTPN1P18031 435 aaKnown RBP14.24□□□□□ -0.13
VMP1-217ENST00000593168 LTBRP36941 435 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 GPD2P43304 727 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 BRCC3P46736 316 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 OR1G1P47890 313 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 PPP1R26Q5T8A7 1209 aaPredicted RBP14.24□□□□□ -0.13
VMP1-217ENST00000593168 LIN9Q5TKA1 542 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 ERICH1Q86X53 443 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 LRRC43Q8N309 656 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 C12orf29Q8N999 325 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 B3GALNT2Q8NCR0 500 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 C1orf131Q8NDD1 294 aaKnown RBP14.24□□□□□ -0.13
VMP1-217ENST00000593168 TPCN2Q8NHX9 752 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 UBE2Q2Q8WVN8 375 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 NAPGQ99747 312 aaPredicted RBP14.24□□□□□ -0.13
VMP1-217ENST00000593168 DPEP3Q9H4B8 488 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 NSUN3Q9H649 340 aaKnown RBP14.24□□□□□ -0.13
VMP1-217ENST00000593168 CLDND1Q9NY35 253 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 CTTNBP2NLQ9P2B4 639 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 DNAJB4Q9UDY4 337 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 PRKAG3Q9UGI9 489 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 CDH9Q9ULB4 789 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 FAN1Q9Y2M0 1017 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 JRKLQ9Y4A0 524 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 ZNF318Q5VUA4 2279 aa14.24□□□□□ -0.13
VMP1-217ENST00000593168 TRIOO75962 3097 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 FNDC1Q4ZHG4 1894 aaPredicted RBP14.23□□□□□ -0.13
VMP1-217ENST00000593168 GRID2IPA4D2P6 1211 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 M0QYV0 167 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 SYN3O14994 580 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 HCRTO43612 131 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 ITGB1P05556 798 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 PCSK1P29120 753 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 IRS1P35568 1242 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 GOLGA7BQ2TAP0 167 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 PAN2Q504Q3 1202 aaKnown RBP14.23□□□□□ -0.13
VMP1-217ENST00000593168 PKDCCQ504Y2 493 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 PLEKHA7Q6IQ23 1121 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 MMS22LQ6ZRQ5 1243 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 HFE2Q6ZVN8 426 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 SLFN11Q7Z7L1 901 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 ADHFE1Q8IWW8 467 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 SYCE1Q8N0S2 351 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 ANKRD52Q8NB46 1076 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 MSANTD4Q8NCY6 345 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 STK32AQ8WU08 396 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 HNRNPABQ99729 332 aaKnown RBP14.23□□□□□ -0.13
VMP1-217ENST00000593168 ACBD6Q9BR61 282 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 C11orf70Q9BRQ4 267 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 MRPL47Q9HD33 250 aaKnown RBP14.23□□□□□ -0.13
VMP1-217ENST00000593168 HESX1Q9UBX0 185 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 STRIP2Q9ULQ0 834 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 TIMM13Q9Y5L4 95 aaPredicted RBP14.23□□□□□ -0.13
VMP1-217ENST00000593168 MYO7AQ13402 2215 aa14.23□□□□□ -0.13
VMP1-217ENST00000593168 KIAA1671Q9BY89 1806 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 I3L4J1 428 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 TADA2AO75478 443 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms