RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 TRAV19A0A0A6YYK7 116 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 LNP1A1A4G5 178 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 BCLAF3A2AJT9 711 aaKnown RBP12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 K7EQS6 105 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 PRPF6O94906 941 aaKnown RBP12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 IL18RAPO95256 599 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 APBB3O95704 486 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 CAVIN2O95810 425 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 PDGFRBP09619 1106 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 DDX6P26196 483 aaKnown RBP eCLIP12.02□□□□□ -0.496e-7■□□□□ 8.8
PRKCSH-220ENST00000593104 LONP1P36776 959 aaKnown RBP12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 OPRD1P41143 372 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 SMARCB1Q12824 385 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 ZNF268Q14587 947 aaPredicted RBP12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 PDGFRLQ15198 375 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 NFE2Q16621 373 aaPredicted RBP12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 EMC10Q5UCC4 262 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 LARP1BQ659C4 914 aaKnown RBP12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 TMEM92Q6UXU6 159 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 SYT13Q7L8C5 426 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 C12orf40Q86WS4 652 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 SPATA2LQ8IUW3 424 aaPredicted RBP12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 CAMKK1Q8N5S9 505 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 MDGA1Q8NFP4 955 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 TSTD1Q8NFU3 115 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 OR5B17Q8NGF7 314 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 KBTBD7Q8WVZ9 684 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 DDX1Q92499 740 aaKnown RBP12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 MYLPFQ96A32 169 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 DNAJC19Q96DA6 116 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 ACBD6Q9BR61 282 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 ST6GALNAC4Q9H4F1 302 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 CRTAC1Q9NQ79 661 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 FSCN3Q9NQT6 498 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 SMPD4Q9NXE4 827 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 SMC3Q9UQE7 1217 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 PCDHGA5Q9Y5G8 931 aa12.02□□□□□ -0.49
PRKCSH-220ENST00000593104 HUS1O60921 280 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 USP17L7P0C7H9 530 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 HOXB3P14651 431 aaPredicted RBP12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 IDEP14735 1019 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 BDNFP23560 247 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 PAX3P23760 479 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 CACNA2D1P54289 1103 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 RPL10AP62906 217 aaKnown RBP12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 SHC2P98077 582 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 MYL7Q01449 175 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 ZNF252P-AS1Q0IIN9 211 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 IFRD2Q12894 506 aaPredicted RBP12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 RABEP1Q15276 862 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 ELF2Q15723 593 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 UAP1L1Q3KQV9 507 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 L1TD1Q5T7N2 865 aaKnown RBP12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 SH3PXD2AQ5TCZ1 1133 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 PMS2CLQ68D20 193 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 KIAA1211LQ6NV74 962 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 USP33Q8TEY7 942 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 LEO1Q8WVC0 666 aaPredicted RBP12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 ELMO3Q96BJ8 720 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 MYRFLQ96LU7 910 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 SYT15Q9BQS2 421 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 RNF38Q9H0F5 515 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 TMEM30AQ9NV96 361 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 FBXO2Q9UK22 296 aaPredicted RBP12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 KIF3AQ9Y496 699 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 ATXN2Q99700 1313 aaKnown RBP12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 ADAMTS9Q9P2N4 1935 aa12.01□□□□□ -0.49
PRKCSH-220ENST00000593104 VPS37CA5D8V6 355 aaPredicted RBP12□□□□□ -0.49
PRKCSH-220ENST00000593104 LEFTY2O00292 366 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 CDX4O14627 284 aaPredicted RBP12□□□□□ -0.49
PRKCSH-220ENST00000593104 GABRDO14764 452 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 SLC26A4O43511 780 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 FOXD2O60548 495 aaPredicted RBP12□□□□□ -0.49
PRKCSH-220ENST00000593104 AKAP3O75969 853 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 RHOBTB1O94844 696 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 ABL1P00519 1130 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 CYP17A1P05093 508 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 HDCP19113 662 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 PNPLA4P41247 253 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 DHPSP49366 369 aaPredicted RBP12□□□□□ -0.49
PRKCSH-220ENST00000593104 IRX4P78413 519 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 CYP27A1Q02318 531 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 KCNB1Q14721 858 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 FILIP1Q7Z7B0 1213 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 CBWD2Q8IUF1 395 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 SYCP3Q8IZU3 236 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 DEFB119Q8N690 84 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 PIGKQ92643 395 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 ATP2A3Q93084 1043 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 TRMT2BQ96GJ1 504 aaKnown RBP12□□□□□ -0.49
PRKCSH-220ENST00000593104 ACCSQ96QU6 501 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 MRPL45Q9BRJ2 306 aaKnown RBP12□□□□□ -0.49
PRKCSH-220ENST00000593104 ABCB6Q9NP58 842 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 ZMIZ1Q9ULJ6 1067 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 CFAP47Q6ZTR5 3102 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 USP24Q9UPU5 2620 aa12□□□□□ -0.49
PRKCSH-220ENST00000593104 SGK1O00141 431 aa11.99□□□□□ -0.49
PRKCSH-220ENST00000593104 TMEM191BP0C7N4 346 aa11.99□□□□□ -0.49
PRKCSH-220ENST00000593104 CHRM1P11229 460 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms