RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 GIPC2Q8TF65 315 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 PSMG2Q969U7 264 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 SMARCD1Q96GM5 515 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 PCMTD1Q96MG8 357 aaPredicted RBP15.85■□□□□ 0.13
DDX39A-221ENST00000593026 HNRNPABQ99729 332 aaKnown RBP15.85■□□□□ 0.13
DDX39A-221ENST00000593026 PHF7Q9BWX1 381 aaPredicted RBP15.85■□□□□ 0.13
DDX39A-221ENST00000593026 PLCB1Q9NQ66 1216 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 RTN4Q9NQC3 1192 aaKnown RBP15.85■□□□□ 0.13
DDX39A-221ENST00000593026 ASAH2Q9NR71 780 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 KRT82Q9NSB4 513 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 UNC80Q8N2C7 3258 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 DENND4AQ7Z401 1863 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 F8VP50 259 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 FAM200BP0CF97 657 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 UCHL3P15374 230 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 FSHRP23945 695 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 USP8P40818 1118 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 KLK7P49862 253 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 CACNA2D1P54289 1103 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 RAPGEF1Q13905 1077 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 SGO2Q562F6 1265 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 PPP1R26Q5T8A7 1209 aaPredicted RBP15.84■□□□□ 0.13
DDX39A-221ENST00000593026 CYP4A22Q5TCH4 519 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 ARHGAP17Q68EM7 881 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 DPY19L2P1Q6NXN4 242 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 PDZD4Q76G19 769 aaPredicted RBP15.84■□□□□ 0.13
DDX39A-221ENST00000593026 DNAJB7Q7Z6W7 309 aaPredicted RBP15.84■□□□□ 0.13
DDX39A-221ENST00000593026 LEMD2Q8NC56 503 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 SHC3Q92529 594 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 C8orf48Q96LL4 319 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 CEP295NLQ96MC4 621 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 ERGIC2Q96RQ1 377 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 DMAP1Q9NPF5 467 aaPredicted RBP15.84■□□□□ 0.13
DDX39A-221ENST00000593026 FAM207AQ9NSI2 230 aaPredicted RBP15.84■□□□□ 0.13
DDX39A-221ENST00000593026 TMEM30AQ9NV96 361 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 AJAP1Q9UKB5 411 aaPredicted RBP15.84■□□□□ 0.13
DDX39A-221ENST00000593026 KIAA1257Q9ULG3 409 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 CNTN6Q9UQ52 1028 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 SIK3Q9Y2K2 1263 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 FHOD1Q9Y613 1164 aa15.84■□□□□ 0.13
DDX39A-221ENST00000593026 A0A1B0GTH6 734 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 RNF225M0QZC1 329 aaPredicted RBP15.83■□□□□ 0.12
DDX39A-221ENST00000593026 TEX33O43247 280 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 CSH1P0DML2 217 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 CSH2P0DML3 217 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 VDRP11473 427 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 MYL4P12829 197 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 ZNF132P52740 706 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 FANCCQ00597 558 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 SMYD5Q6GMV2 418 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 HS6ST3Q8IZP7 471 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 STKLD1Q8NE28 680 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 NEK11Q8NG66 645 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 SPATA17Q96L03 361 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 GANQ9H2C0 597 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 PRKAG3Q9UGI9 489 aa15.83■□□□□ 0.12
DDX39A-221ENST00000593026 SLC38A8A6NNN8 435 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 ZNF197O14709 1029 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 FGF19O95750 216 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 SP100P23497 879 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-221ENST00000593026 EPHA5P54756 1037 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 MTMR3Q13615 1198 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 DRAP1Q14919 205 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-221ENST00000593026 SLC5A9Q2M3M2 681 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 GOLGA7BQ2TAP0 167 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 GET4Q7L5D6 327 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-221ENST00000593026 TMC8Q8IU68 726 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 ADHFE1Q8IWW8 467 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 RPGRIP1Q96KN7 1286 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 NAP1L5Q96NT1 182 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-221ENST00000593026 KCNK16Q96T55 309 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 SMOQ99835 787 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 NAA15Q9BXJ9 866 aaKnown RBP15.82■□□□□ 0.12
DDX39A-221ENST00000593026 LRRC3Q9BY71 257 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 CSNK1G1Q9HCP0 422 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 ZNF334Q9HCZ1 680 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-221ENST00000593026 AVENQ9NQS1 362 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-221ENST00000593026 HESX1Q9UBX0 185 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 MAGED2Q9UNF1 606 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-221ENST00000593026 MRPS23Q9Y3D9 190 aaKnown RBP15.82■□□□□ 0.12
DDX39A-221ENST00000593026 NR2E1Q9Y466 385 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 DAAM1Q9Y4D1 1078 aa15.82■□□□□ 0.12
DDX39A-221ENST00000593026 O00370 1275 aa15.81■□□□□ 0.12
DDX39A-221ENST00000593026 EPHB6O15197 1021 aa15.81■□□□□ 0.12
DDX39A-221ENST00000593026 NOL4O94818 638 aa15.81■□□□□ 0.12
DDX39A-221ENST00000593026 HMGA1P17096 107 aaKnown RBP15.81■□□□□ 0.12
DDX39A-221ENST00000593026 NPR3P17342 541 aa15.81■□□□□ 0.12
DDX39A-221ENST00000593026 BRD2P25440 801 aaKnown RBP15.81■□□□□ 0.12
DDX39A-221ENST00000593026 GBP2P32456 591 aaPredicted RBP15.81■□□□□ 0.12
DDX39A-221ENST00000593026 UBASH3AP57075 661 aa15.81■□□□□ 0.12
DDX39A-221ENST00000593026 MAP3K7CLP57077 242 aa15.81■□□□□ 0.12
DDX39A-221ENST00000593026 SLC8A3P57103 927 aa15.81■□□□□ 0.12
DDX39A-221ENST00000593026 POLR2FP61218 127 aaKnown RBP15.81■□□□□ 0.12
DDX39A-221ENST00000593026 ZP2Q05996 745 aa15.81■□□□□ 0.12
DDX39A-221ENST00000593026 CLEC20AQ6ZU45 233 aa15.81■□□□□ 0.12
DDX39A-221ENST00000593026 DENND5BQ6ZUT9 1274 aa15.81■□□□□ 0.12
DDX39A-221ENST00000593026 OTOP3Q7RTS5 596 aa15.81■□□□□ 0.12
DDX39A-221ENST00000593026 TDRD5Q8NAT2 981 aaKnown RBP15.81■□□□□ 0.12
DDX39A-221ENST00000593026 ZMIZ2Q8NF64 920 aa15.81■□□□□ 0.12
DDX39A-221ENST00000593026 ITFG1Q8TB96 612 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms